RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TRIM16LQ309B1 348 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 DEFB113Q30KQ7 82 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 ZNF672Q499Z4 452 aaPredicted RBP11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 HIST2H3PS2Q5TEC6 136 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 ZNF774Q6NX45 483 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 FAM131AQ6UXB0 335 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 CLEC9AQ6UXN8 241 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 HIST2H3AQ71DI3 136 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 CATSPERDQ86XM0 798 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 ZNF584Q8IVC4 421 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 PARP16Q8N5Y8 322 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 C18orf12Q96KH6 178 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 FRRS1LQ9P0K9 344 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 COMMD3Q9UBI1 195 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 GDF2Q9UK05 429 aaPredicted RBP11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 ATP23Q9Y6H3 246 aa11.64□□□□□ -0.55
CSNK1D-220ENST00000581737 MEGF11A6BM72 1044 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 OR6C6A6NF89 314 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 FABP12A6NFH5 140 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 VSTM5A8MXK1 200 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 SHISA9B4DS77 424 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 CTDSP2O14595 271 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 RER1O15258 196 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 ISG15P05161 165 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 SRMP19623 302 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 APEX1P27695 318 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 NANOS3P60323 173 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 RPS23P62266 143 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 SPOCK1Q08629 439 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 DBPQ10586 325 aaPredicted RBP11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 WDR38Q5JTN6 314 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 ELFN2Q5R3F8 820 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 C20orf204Q6ZNR8 217 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 MYPOPQ86VE0 399 aaPredicted RBP11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 LINC00346Q8IVM7 164 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 CIARTQ8N365 385 aaPredicted RBP11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 NUP37Q8NFH4 326 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 OR1F12Q8NHA8 337 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 ZNF671Q8TAW3 534 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 SETD6Q8TBK2 473 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 C15orf40Q8WUR7 153 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 AKAP1Q92667 903 aaKnown RBP eCLIP11.63□□□□□ -0.559e-12■■■■□ 22.6
CSNK1D-220ENST00000581737 FBXW5Q969U6 566 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 SPTSSAQ969W0 71 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 DCLRE1CQ96SD1 692 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 ATF6BQ99941 703 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 UBTD1Q9HAC8 227 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 ABCB9Q9NP78 766 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 NOX4Q9NPH5 578 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 FAIMQ9NVQ4 179 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 EIF3KQ9UBQ5 218 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 DAPK2Q9UIK4 370 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 OR52A1Q9UKL2 312 aa11.63□□□□□ -0.55
CSNK1D-220ENST00000581737 RTTNQ86VV8 2226 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 A0A1B0GVI7 797 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 A0A1W2PPR1 153 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 C5orf49A4QMS7 147 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 PRR32B1ATL7 298 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 SYNGR3O43761 229 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 LY6G6DO95868 133 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 PLAUP00749 431 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 ZNF35P13682 527 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 CALCRP30988 508 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 RPS27P42677 84 aaKnown RBP11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 INPP1P49441 399 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 RPS11P62280 158 aaKnown RBP eCLIP11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 CCDC92Q53HC0 331 aaPredicted RBP11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 OTPQ5XKR4 325 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 CORO6Q6QEF8 472 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 CFAP77Q6ZQR2 320 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 SPATC1Q76KD6 591 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 LAX1Q8IWV1 398 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 C1orf174Q8IYL3 243 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 ZNF611Q8N823 705 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 CPEB3Q8NE35 698 aaKnown RBP11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 OR13C5Q8NGS8 318 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 TMEM106AQ96A25 262 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 MAP6Q96JE9 813 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 POM121L2Q96KW2 1035 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 AMELYQ99218 206 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 BCL2L14Q9BZR8 327 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 PLEKHF2Q9H8W4 249 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 ABCB10Q9NRK6 738 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 FOXJ3Q9UPW0 622 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 ETV7Q9Y603 341 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 V9GY05 133 aa11.62□□□□□ -0.55
CSNK1D-220ENST00000581737 JMJD1CQ15652 2540 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 RAI1Q7Z5J4 1906 aaPredicted RBP11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 AIPO00170 330 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 HEXAP06865 529 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 ERCC1P07992 297 aaPredicted RBP11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 CALCBP10092 127 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 FSTP19883 344 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 CCNOP22674 350 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 RAD52P43351 418 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 NR4A2P43354 598 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 KIR3DL2P43630 455 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 PITPNAQ00169 270 aa11.61□□□□□ -0.55
CSNK1D-220ENST00000581737 SCN1BQ07699 218 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms