RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 DEGS2Q6QHC5 323 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 DRAM2Q6UX65 266 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 RFPL4BQ6ZWI9 263 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 ZNF101Q8IZC7 436 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 STX19Q8N4C7 294 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 GTF3AQ92664 365 aaKnown RBP16.3■□□□□ 0.2
LIMD2-209ENST00000580222 TMEM80Q96HE8 168 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 MYCBPQ99417 103 aaPredicted RBP16.3■□□□□ 0.2
LIMD2-209ENST00000580222 ALG8Q9BVK2 526 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 BCL2L14Q9BZR8 327 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 PCDHGB5Q9Y5G0 923 aa16.3■□□□□ 0.2
LIMD2-209ENST00000580222 MAGEB4O15481 346 aaPredicted RBP16.29■□□□□ 0.2
LIMD2-209ENST00000580222 ANXA2P07355 339 aaKnown RBP16.29■□□□□ 0.2
LIMD2-209ENST00000580222 MYL12AP19105 171 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 UCP2P55851 309 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 ACTA2P62736 377 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 ACTG2P63267 376 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 ST3GAL4Q11206 333 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 RSPO1Q2MKA7 263 aaPredicted RBP16.29■□□□□ 0.2
LIMD2-209ENST00000580222 RBM48Q5RL73 367 aaKnown RBP16.29■□□□□ 0.2
LIMD2-209ENST00000580222 PLEKHG7Q6ZR37 379 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 LHFPL3Q86UP9 236 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 YIPF7Q8N8F6 280 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 DEFB108BQ8NET1 73 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 OR1J1Q8NGS3 322 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 RAB39BQ96DA2 213 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 MMP26Q9NRE1 261 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 CHCHD3Q9NX63 227 aaKnown RBP16.29■□□□□ 0.2
LIMD2-209ENST00000580222 ERVK13-1Q9NX77 482 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 UBAP1Q9NZ09 502 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 MRM2Q9UI43 246 aaKnown RBP16.29■□□□□ 0.2
LIMD2-209ENST00000580222 GNG8Q9UK08 70 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 BLOC1S6Q9UL45 172 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 DIMT1Q9UNQ2 313 aaKnown RBP16.29■□□□□ 0.2
LIMD2-209ENST00000580222 EXOSC1Q9Y3B2 195 aaKnown RBP16.29■□□□□ 0.2
LIMD2-209ENST00000580222 N6AMT1Q9Y5N5 214 aa16.29■□□□□ 0.2
LIMD2-209ENST00000580222 A0A1W2PPW3 197 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 METTL15A6NJ78 407 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 PTGES3LE9PB15 166 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 J3QW42 95 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 ICMTO60725 284 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 LCATP04180 440 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 SLC2A1P11166 492 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 PSMA6P60900 246 aaKnown RBP16.28■□□□□ 0.2
LIMD2-209ENST00000580222 PPP1CBP62140 327 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 GALEQ14376 348 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 ZNF829Q3KNS6 432 aaPredicted RBP16.28■□□□□ 0.2
LIMD2-209ENST00000580222 CDONQ4KMG0 1287 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 TP53I3Q53FA7 332 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 APOBEC3DQ96AK3 386 aaPredicted RBP16.28■□□□□ 0.2
LIMD2-209ENST00000580222 TMIGD2Q96BF3 282 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 JAM3Q9BX67 310 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 BRD7Q9NPI1 651 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 TBCCD1Q9NVR7 557 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 FKBP14Q9NWM8 211 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 TAAR3PQ9P1P4 343 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 NUP50Q9UKX7 468 aa16.28■□□□□ 0.2
LIMD2-209ENST00000580222 C17orf100A8MU93 164 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 ALX3O95076 343 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 NGFP01138 241 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 GATA3P23771 443 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 CRHBPP24387 322 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 RBMXP38159 391 aaKnown RBP16.27■□□□□ 0.2
LIMD2-209ENST00000580222 CRYBB2P43320 205 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 ZNF121P58317 390 aaPredicted RBP16.27■□□□□ 0.2
LIMD2-209ENST00000580222 KRTAP10-3P60369 221 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 ERVS71-1P61550 626 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 FBLN7Q53RD9 439 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 SPATA46Q5T0L3 261 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 RGS7BPQ6MZT1 257 aaPredicted RBP16.27■□□□□ 0.2
LIMD2-209ENST00000580222 FAM57BQ71RH2 274 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 NAA40Q86UY6 237 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 MYDGFQ969H8 173 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 COG8Q96MW5 612 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 SP140LQ9H930 580 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 GTF2A1LQ9UNN4 478 aa16.27■□□□□ 0.2
LIMD2-209ENST00000580222 J3QLW9 94 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 TBX1O43435 398 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 SULT1C4O75897 302 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 RPP14O95059 124 aaKnown RBP16.26■□□□□ 0.19
LIMD2-209ENST00000580222 CDK1P06493 297 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 ZNF19P17023 458 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 EEF1B2P24534 225 aaKnown RBP16.26■□□□□ 0.19
LIMD2-209ENST00000580222 DCTDP32321 178 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 ZNF684Q5T5D7 378 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 C1orf174Q8IYL3 243 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 KLHL36Q8N4N3 616 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 KIR3DL3Q8N743 410 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 OR5L1Q8NGL2 311 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 SLC25A40Q8TBP6 338 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 WFDC12Q8WWY7 111 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 SLC25A28Q96A46 364 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 PGAM5Q96HS1 289 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 C4orf36Q96KX1 117 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 ZMAT3Q9HA38 289 aaKnown RBP16.26■□□□□ 0.19
LIMD2-209ENST00000580222 ACOXLQ9NUZ1 547 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 PAK1IP1Q9NWT1 392 aaPredicted RBP16.26■□□□□ 0.19
LIMD2-209ENST00000580222 PTTG3PQ9NZH4 202 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 LRRC42Q9Y546 428 aa16.26■□□□□ 0.19
LIMD2-209ENST00000580222 IGHV1-69-2A0A0G2JMI3 117 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms