RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ACTA1P68133 377 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 Q6ZSR3 168 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 C1orf87Q8N0U7 546 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 YIPF7Q8N8F6 280 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 OR8S1Q8NH09 359 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 APH1BQ8WW43 257 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 LGALS12Q96DT0 336 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 ITPKCQ96DU7 683 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 FN3KRPQ9HA64 309 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 TMEM165Q9HC07 324 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 GPR84Q9NQS5 396 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 UFSP2Q9NUQ7 469 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 OR52A1Q9UKL2 312 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 PCDHGB1Q9Y5G3 927 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 SVEP1Q4LDE5 3571 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 DBTP11182 482 aaKnown RBP16.22■□□□□ 0.19
SS18-208ENST00000577751 GNALP38405 381 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 ZNF91Q05481 1191 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 ZNF691Q5VV52 312 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 WDR86Q86TI4 376 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 C11orf53Q8IXP5 236 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 SPICQ8N5J4 248 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 OR11L1Q8NGX0 322 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 RORBQ92753 470 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 RNF166Q96A37 237 aaPredicted RBP16.22■□□□□ 0.19
SS18-208ENST00000577751 PAPOLGQ9BWT3 736 aaKnown RBP16.22■□□□□ 0.19
SS18-208ENST00000577751 PATZ1Q9HBE1 687 aaKnown RBP16.22■□□□□ 0.19
SS18-208ENST00000577751 ABCB9Q9NP78 766 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 MRPS18AQ9NVS2 196 aaKnown RBP16.22■□□□□ 0.19
SS18-208ENST00000577751 UBAP1Q9NZ09 502 aa16.22■□□□□ 0.19
SS18-208ENST00000577751 PPIAL4EA0A075B759 164 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 A0A1B0GTI1 187 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 ERICH4A6NGS2 130 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 PPIAL4DF5H284 164 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 WBP4O75554 376 aaKnown RBP16.21■□□□□ 0.19
SS18-208ENST00000577751 DHRS3O75911 302 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 RPP14O95059 124 aaKnown RBP16.21■□□□□ 0.19
SS18-208ENST00000577751 GRPP07492 148 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 PPIAL4FP0DN26 164 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 IRF2P14316 349 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 ADARB1P78563 741 aaKnown RBP16.21■□□□□ 0.19
SS18-208ENST00000577751 IL5RAQ01344 420 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 PRDX4Q13162 271 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 CDONQ4KMG0 1287 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 FAM201AQ5SY85 155 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 BCL2L15Q5TBC7 163 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 ZBTB37Q5TC79 503 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 TTC23Q5W5X9 447 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 KCTD20Q7Z5Y7 419 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 CATSPERDQ86XM0 798 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 MUC20Q8N307 709 aaPredicted RBP16.21■□□□□ 0.19
SS18-208ENST00000577751 KLHL36Q8N4N3 616 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 ACBD7Q8N6N7 88 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 SEMA6DQ8NFY4 1073 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 OR51F2Q8NH61 342 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 PIGCQ92535 297 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 TMEM186Q96B77 213 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 AMBNQ9NP70 447 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 RNF7Q9UBF6 113 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 CDC42EP3Q9UKI2 254 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 PPIAL4AQ9Y536 164 aa16.21■□□□□ 0.19
SS18-208ENST00000577751 ZNF816-ZNF321PA0A0X1KG74 233 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 DAPL1A0PJW8 107 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 ANXA2P2A6NMY6 339 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 ZNF850A8MQ14 1090 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 F5H0A9 414 aaPredicted RBP16.2■□□□□ 0.18
SS18-208ENST00000577751 PLPP2O43688 288 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 ZNF205O95201 554 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 CLIC3O95833 236 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 RIPPLY1Q0D2K3 151 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 RAB40BQ12829 278 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 ZNF154Q13106 437 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 ZNF404Q494X3 552 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 TP53I3Q53FA7 332 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 FAM76BQ5HYJ3 339 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 GLCCI1Q86VQ1 547 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 COMMD2Q86X83 199 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 DHRSXQ8N5I4 330 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 OR1M1Q8NGA1 313 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 OR5P3Q8WZ94 311 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 FAM71F1Q96KD3 344 aaPredicted RBP16.2■□□□□ 0.18
SS18-208ENST00000577751 MICU1Q9BPX6 476 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 FGF23Q9GZV9 251 aaPredicted RBP16.2■□□□□ 0.18
SS18-208ENST00000577751 TLNRD1Q9H1K6 362 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 LPAR2Q9HBW0 351 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 C1orf123Q9NWV4 160 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 LPAR3Q9UBY5 353 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 NKX1-2Q9UD57 310 aaPredicted RBP16.2■□□□□ 0.18
SS18-208ENST00000577751 GTF2A1LQ9UNN4 478 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 SLC22A13Q9Y226 551 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 V9GYS6 101 aa16.2■□□□□ 0.18
SS18-208ENST00000577751 TRAV20A0A0B4J274 112 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 CEACAM18A8MTB9 384 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 MTRF1O75570 445 aaKnown RBP16.19■□□□□ 0.18
SS18-208ENST00000577751 LHBP01229 141 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 IGHA1P01876 353 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 WNT2P09544 360 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 CCL1P22362 96 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 CPT2P23786 658 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 CR1LQ2VPA4 569 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms