RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SLC16A9	Q7RTY1	509 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SLC36A1	Q7Z2H8	476 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	TMEM179B	Q7Z7N9	219 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	C3orf56	Q8N813	242 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	PNLDC1	Q8NA58	520 aa	Known RBP	4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	OR10S1	Q8NGN2	331 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	OTOS	Q8NHW6	89 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ZNRF4	Q8WWF5	429 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ASB17	Q8WXJ9	295 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	C22orf15	Q8WYQ4	148 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	PIGC	Q92535	297 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	DVL3	Q92997	716 aa	Predicted RBP	4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SGK3	Q96BR1	496 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SIGLEC11	Q96RL6	698 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	RSRP1	Q9BUV0	290 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	YIPF3	Q9GZM5	350 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ZMAT3	Q9HA38	289 aa	Known RBP	4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	RNPEPL1	Q9HAU8	725 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SLC25A19	Q9HC21	320 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	MMP26	Q9NRE1	261 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	AP4S1	Q9Y587	144 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	MPC1	Q9Y5U8	109 aa		4.54	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	NIPBL	Q6KC79	2804 aa	eCLIP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	IGHV2-70D	A0A0C4DH43	119 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	KIR2DS1	A0A191URI9	304 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	hCG_38984	A0A1B0GV85	526 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	TMEM269	A0A1B0GVZ9	245 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ACOD1	A6NK06	481 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SLC22A31	A6NKX4	558 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	TMEM210	A6NLX4	147 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524		F5H0A9	414 aa	Predicted RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	TRAPPC2L	H3BP13	241 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	P2RY10	O00398	339 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	TMPRSS2	O15393	492 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	NDUFB3	O43676	98 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ZNF254	O75437	659 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ECD	O95905	644 aa	Predicted RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	GYPA	P02724	150 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	CRYBA1	P05813	215 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	MRPL3	P09001	348 aa	Known RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	PPIAL4G	P0DN37	164 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ATP6V1B1	P15313	513 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	MUC1	P15941	1255 aa	Predicted RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	PMEL	P40967	661 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	OPRL1	P41146	370 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	BPIFB3	P59826	476 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SEC61A1	P61619	476 aa	Known RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	FAM3A	P98173	230 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	BNIP1	Q12981	228 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	PRDX4	Q13162	271 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	PTGES3	Q15185	160 aa	Known RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ATP6AP1	Q15904	470 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	LRRC10	Q5BKY1	277 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	FAM201A	Q5SY85	155 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	METTL11B	Q5VVY1	283 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	TMEM236	Q5W0B7	351 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	WDR25	Q64LD2	544 aa	Predicted RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	DEGS2	Q6QHC5	323 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	CCDC121	Q6ZUS5	278 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	MEPCE	Q7L2J0	689 aa	Known RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	GID4	Q8IVV7	300 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ZDHHC23	Q8IYP9	409 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	CMTM4	Q8IZR5	234 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	HS3ST5	Q8IZT8	346 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	PARP8	Q8N3A8	854 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SIGLECL1	Q8N7X8	197 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SCCPDH	Q8NBX0	429 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	C19orf18	Q8NEA5	215 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ZNF671	Q8TAW3	534 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	FAM216A	Q8WUB2	273 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	LRRC29	Q8WV35	223 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ST8SIA4	Q92187	359 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ITFG2	Q969R8	447 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SPSB4	Q96A44	273 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SLC25A28	Q96A46	364 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	RNF170	Q96K19	258 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	CNN2	Q99439	309 aa	Known RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	MNT	Q99583	582 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	TEAD3	Q99594	435 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	PCGF1	Q9BSM1	259 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ADI1	Q9BV57	179 aa		4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	CADM1	Q9BY67	442 aa	Known RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.53	□□□□□ -1.68
ARHGAP28-208	ENST00000577524	IGHV3OR16-10	A0A075B7F0	116 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524	TRAV40	A0A0B4J280	105 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524		A0A1B0GWJ7	208 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524	SNTN	A6NMZ2	147 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524	ZNF850	A8MQ14	1090 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524	LOC110117498-PIK3R3	F6TDL0	507 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524	PSMD9	O00233	223 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524	CDIPT	O14735	213 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524	TOX4	O94842	621 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524	KRT8	P05787	483 aa		4.52	□□□□□ -1.69
ARHGAP28-208	ENST00000577524	ALOX5AP	P20292	161 aa		4.52	□□□□□ -1.69

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