RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 C14orf119Q9NWQ9 140 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 PRR32B1ATL7 298 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 M0R129 80 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 PSMD9O00233 223 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 MRPL3P09001 348 aaKnown RBP11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 ANXA8P13928 327 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 RPS7P62081 194 aaKnown RBP11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 SLC9A3R2Q15599 337 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 TEX36Q5VZQ5 186 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 RUSC1-AS1Q66K80 236 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 WDR82Q6UXN9 313 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 RHOUQ7L0Q8 258 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 C3orf56Q8N813 242 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 LRRC29Q8WV35 223 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 ITPKCQ96DU7 683 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 PCGF1Q9BSM1 259 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 TTTY10Q9BZA0 68 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 OR10A2Q9H208 303 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 SLC25A19Q9HC21 320 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 ERVK-18Q9QC07 812 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 LRP12Q9Y561 859 aa11.26□□□□□ -0.61
CUEDC1-204ENST00000577497 DOCK11Q5JSL3 2073 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 TRAV38-1A0A0B4J264 116 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 CCDC182A6NF36 153 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 DVL1O14640 695 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 CDIPTO14735 213 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 GSC2O15499 205 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 ENSAO43768 121 aaKnown RBP11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 MITFO75030 526 aaPredicted RBP11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 APOC1P02654 83 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 HMGN1P05114 100 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 HKR1P10072 659 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 MMP9P14780 707 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 ALOX5APP20292 161 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 CFHR2P36980 270 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 NPY4RP50391 375 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 DAPP51397 102 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 PSMA6P60900 246 aaKnown RBP11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 APOFQ13790 326 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 DEFB112Q30KQ8 113 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 FAHD1Q6P587 224 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 BCDIN3DQ7Z5W3 292 aaKnown RBP11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 OR8B12Q8NGG6 310 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 HPSE2Q8WWQ2 592 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 UTP4Q969X6 686 aaKnown RBP11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 TBX15Q96SF7 602 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 PAPOLBQ9NRJ5 636 aaKnown RBP11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 TVP23BQ9NYZ1 205 aa11.25□□□□□ -0.61
CUEDC1-204ENST00000577497 ZNF850A8MQ14 1090 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 ZNF879B4DU55 563 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 TMPRSS2O15393 492 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 PRKYO43930 277 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 TFF1P04155 84 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 RNASE1P07998 156 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 HOXB6P17509 224 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 CFL1P23528 166 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 EPHA2P29317 976 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 GNALP38405 381 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 CRISP1P54107 249 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 GMFBP60983 142 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 MZT1Q08AG7 82 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 PRDX4Q13162 271 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 KCNJ8Q15842 424 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 SNAPC1Q16533 368 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 DMRTC1Q5HYR2 192 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 WDR38Q5JTN6 314 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 SLC35D3Q5M8T2 416 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 BTN2A1Q7KYR7 527 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 FAM216BQ8N7L0 139 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 RPL3LQ92901 407 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 CCL13Q99616 98 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 TLNRD1Q9H1K6 362 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 WDR13Q9H1Z4 485 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 RGCCQ9H4X1 137 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 YY1AP1Q9H869 796 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 SP140LQ9H930 580 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 RNPEPL1Q9HAU8 725 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 KIF17Q9P2E2 1029 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 LAMP5Q9UJQ1 280 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 COPS3Q9UNS2 423 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 PCDHGB1Q9Y5G3 927 aa11.24□□□□□ -0.61
CUEDC1-204ENST00000577497 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 TOX4O94842 621 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 SELLP14151 372 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 AMY2BP19961 511 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 BNIP1Q12981 228 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 PTGES3Q15185 160 aaKnown RBP11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 CD276Q5ZPR3 534 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 GALNT4Q8N4A0 578 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 CSNK2A3Q8NEV1 391 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 OR5T2Q8NGG2 359 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 OR5P3Q8WZ94 311 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 ST8SIA4Q92187 359 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 TEAD3Q99594 435 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 PKP2Q99959 881 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 SIRPDQ9H106 197 aa11.23□□□□□ -0.61
CUEDC1-204ENST00000577497 TRIM36Q9NQ86 728 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms