RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 SMN1Q16637 294 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ZNF181Q2M3W8 571 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 TMEM249Q2WGJ8 235 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CATSPERDQ86XM0 798 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 C1orf87Q8N0U7 546 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 PLPP7Q8NBV4 271 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 MAPK1IP1LQ8NDC0 245 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 SEMA6DQ8NFY4 1073 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 OR52I1Q8NGK6 324 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 FAM71F1Q96KD3 344 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 LYZL4Q96KX0 146 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 MICU1Q9BPX6 476 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 JAM3Q9BX67 310 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 FN3KRPQ9HA64 309 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 GCM1Q9NP62 436 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 FGF20Q9NP95 211 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ACOXLQ9NUZ1 547 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CACNG2Q9Y698 323 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 JMJD1CQ15652 2540 aa10.75□□□□□ -0.69
CDK5RAP3-203ENST00000577442 FN1P02751 2386 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 EFCAB10A6NFE3 127 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 DHRS3O75911 302 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CST4P01036 141 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 IGLV3-1P01715 115 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 HTR1AP08908 422 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 UBCP0CG48 685 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 MYL12AP19105 171 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ACKR3P25106 362 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 SPRNQ5BIV9 151 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 DOK3Q7L591 496 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 MOGAT3Q86VF5 341 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 Q8TCH9 128 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 RORBQ92753 470 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 C4orf36Q96KX1 117 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 HIST1H2AAQ96QV6 131 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 RTL8AQ9BWD3 113 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CHCHD3Q9NX63 227 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ERVK13-1Q9NX77 482 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ENPP5Q9UJA9 477 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 MYRFQ9Y2G1 1151 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 EXOSC1Q9Y3B2 195 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 RHBDD3Q9Y3P4 386 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 WIPI2Q9Y4P8 454 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 NPTNQ9Y639 398 aa10.74□□□□□ -0.69
CDK5RAP3-203ENST00000577442 DOCK11Q5JSL3 2073 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 NIPBLQ6KC79 2804 aaeCLIP10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ISPDA4D126 451 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 J3QLW9 94 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 SYT7O43581 403 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 PTBP3O95758 552 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 LY6G6DO95868 133 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 RPSAP08865 295 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 PIPP12273 146 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ZNF12P17014 697 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ZNF19P17023 458 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CCL1P22362 96 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 OR12D2P58182 307 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 BTG1P62324 171 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 MVKQ03426 396 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 PRDX4Q13162 271 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 MAB21L1Q13394 359 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 WDR38Q5JTN6 314 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 C6orf52Q5T4I8 152 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 AVPI1Q5T686 147 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 FDX2Q6P4F2 183 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 IZUMO2Q6UXV1 221 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 LHFPL3Q86UP9 236 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ZDHHC23Q8IYP9 409 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 MUC20Q8N307 709 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 SPICQ8N5J4 248 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 OR2G2Q8NGZ5 317 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 FBLIM1Q8WUP2 373 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 DVL3Q92997 716 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 RAB39BQ96DA2 213 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 PLEKHA1Q9HB21 404 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 TREM2Q9NZC2 230 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CNOT2Q9NZN8 540 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 DIMT1Q9UNQ2 313 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 SLC22A13Q9Y226 551 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 PIGLQ9Y2B2 252 aa10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 RRP15Q9Y3B9 282 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-203ENST00000577442 LOC107986453A0A1B0GWG9 222 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 A6NLC8 198 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 TMEM210A6NLX4 147 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 ZNF850A8MQ14 1090 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 TMEM178BH3BS89 294 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 P2RY10O00398 339 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CD5LO43866 347 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 PSMB10P40306 273 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 VHLP40337 213 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 MDH2P40926 338 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CCR9P51686 369 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 GBX2P52951 348 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CDH15P55291 814 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CSNK2BP67870 215 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 TMEM244Q5VVB8 128 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 PRAMEF6Q5VXH4 476 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 CYB5R2Q6BCY4 276 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 TMPRSS11AQ6ZMR5 421 aa10.72□□□□□ -0.69
CDK5RAP3-203ENST00000577442 KRT74Q7RTS7 529 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms