RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, human

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDE1-211	ENST00000576502	PMEL	P40967	661 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	MAP2K3	P46734	347 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	ROM1	Q03395	351 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	TMED1	Q13445	227 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	MPPED2	Q15777	294 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	CD276	Q5ZPR3	534 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	RBMS3	Q6XE24	437 aa	Known RBP	11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	USP43	Q70EL4	1123 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	THAP5	Q7Z6K1	395 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	PHC2	Q8IXK0	858 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	GALNT4	Q8N4A0	578 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	OR8B12	Q8NGG6	310 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	OR8J1	Q8NGP2	316 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	DVL3	Q92997	716 aa	Predicted RBP	11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	RFK	Q969G6	155 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	OR8B4	Q96RC9	309 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	GABARAPL3	Q9BY60	117 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	RIBC2	Q9H4K1	309 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	HAO2	Q9NYQ3	351 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	C5orf63	A6NC05	138 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	SAC3D1	A6NKF1	404 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	ENSA	O43768	121 aa	Known RBP	11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	MTRF1	O75570	445 aa	Known RBP	11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	CST4	P01036	141 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	PPIAL4G	P0DN37	164 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	ADRA2C	P18825	462 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	ATP6V1E1	P36543	226 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	SEC61A1	P61619	476 aa	Known RBP	11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	EGR3	Q06889	387 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	MICB	Q29980	383 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	C11orf91	Q3C1V1	193 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	KRTAP24-1	Q3LI83	254 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	ZNF322	Q6U7Q0	402 aa	Predicted RBP	11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	SLC35F2	Q8IXU6	374 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	ZDHHC23	Q8IYP9	409 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	DEFB108B	Q8NET1	73 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	OR1M1	Q8NGA1	313 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	PYDC1	Q8WXC3	89 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	RAB40A	Q8WXH6	277 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	IL4I1	Q96RQ9	567 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	C19orf24	Q9BVV8	132 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	CLN6	Q9NWW5	311 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	IMPAD1	Q9NX62	359 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	KLHDC2	Q9Y2U9	406 aa		11.57	□□□□□ -0.56
NDE1-211	ENST00000576502	IGHV2-70D	A0A0C4DH43	119 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	SNTN	A6NMZ2	147 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	C3orf80	F5H4A9	247 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	TRAPPC2L	H3BP13	241 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	TRIM77	I1YAP6	450 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	ADAM20	O43506	726 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	AVP	P01185	164 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	KRT8	P05787	483 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	LIPF	P07098	398 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	MUC1	P15941	1255 aa	Predicted RBP	11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	CXCR4	P61073	352 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	RIPPLY1	Q0D2K3	151 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	PRDX4	Q13162	271 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	FAM201A	Q5SY85	155 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	ZBTB37	Q5TC79	503 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	AADACL4	Q5VUY2	407 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	WDR25	Q64LD2	544 aa	Predicted RBP	11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	KCTD8	Q6ZWB6	473 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	SEMA6D	Q8NFY4	1073 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	LRRC29	Q8WV35	223 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	TRUB1	Q8WWH5	349 aa	Known RBP	11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	PIGC	Q92535	297 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	TECTB	Q96PL2	329 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	MYCBP	Q99417	103 aa	Predicted RBP	11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	PBOV1	Q9GZY1	135 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	MMP26	Q9NRE1	261 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	NUFIP1	Q9UHK0	495 aa	Known RBP	11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	NUP50	Q9UKX7	468 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	GTF2A1L	Q9UNN4	478 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	RHBDD3	Q9Y3P4	386 aa		11.56	□□□□□ -0.56
NDE1-211	ENST00000576502	ZNF850	A8MQ14	1090 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	LOC110117498-PIK3R3	F6TDL0	507 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	ECD	O95905	644 aa	Predicted RBP	11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	ANOS1	P23352	680 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	EPHA2	P29317	976 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	HTR1F	P30939	366 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	CD80	P33681	288 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	PSMB10	P40306	273 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	HCCS	P53701	268 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	HILS1	P60008	231 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	EFNB1	P98172	346 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	PAX8	Q06710	450 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	HNRNPA0	Q13151	305 aa	Known RBP	11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	KPNB1	Q14974	876 aa	Known RBP	11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	BCL2L15	Q5TBC7	163 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	SLC36A1	Q7Z2H8	476 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	OR51G2	Q8NGK0	314 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	OR10Z1	Q8NGY1	313 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	C12orf43	Q96C57	262 aa	Known RBP	11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	ITPKC	Q96DU7	683 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	RNF170	Q96K19	258 aa		11.55	□□□□□ -0.56
NDE1-211	ENST00000576502	PKP2	Q99959	881 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms