RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TMEM100Q9NV29 134 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 PAK1IP1Q9NWT1 392 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-216ENST00000575599 KCNS2Q9ULS6 477 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 NSD1Q96L73 2696 aaPredicted RBP11.21□□□□□ -0.62
RPAIN-216ENST00000575599 SETD2Q9BYW2 2564 aaPredicted RBP11.21□□□□□ -0.62
RPAIN-216ENST00000575599 CD300LBA8K4G0 201 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 PSMD9O00233 223 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 LMX1BO60663 402 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 CRLF1O75462 422 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 APOC1P02654 83 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 SRP9P49458 86 aaKnown RBP11.2□□□□□ -0.62
RPAIN-216ENST00000575599 KCTD8Q6ZWB6 473 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 RHOUQ7L0Q8 258 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 KRT77Q7Z794 578 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 PEG10Q86TG7 708 aaKnown RBP11.2□□□□□ -0.62
RPAIN-216ENST00000575599 LHFPL3Q86UP9 236 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 SPARTQ8N0X7 666 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 KLHL36Q8N4N3 616 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 LINC01356Q8N9X3 169 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 OR56B2PQ8NGI1 322 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 SGCDQ92629 289 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 REEP6Q96HR9 211 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 PGAM5Q96HS1 289 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 MEGF10Q96KG7 1140 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 MND1Q9BWT6 205 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 CDCA4Q9BXL8 241 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 SP140LQ9H930 580 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 LPAR2Q9HBW0 351 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 TMEM106BQ9NUM4 274 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 PPP1R3CQ9UQK1 317 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 LRP12Q9Y561 859 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 DYSFO75923 2080 aa11.2□□□□□ -0.62
RPAIN-216ENST00000575599 ABCA2Q9BZC7 2435 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 IGHA1P01876 353 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 ALOX5APP20292 161 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 CA6P23280 308 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 MMP16P51512 607 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 ACTA2P62736 377 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 ACTG2P63267 376 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 OR8G1Q15617 311 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 PRSS45Q7RTY3 260 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 FAM220AQ7Z4H9 259 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 OR52H1Q8NGJ2 320 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF420Q8TAQ5 688 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-216ENST00000575599 ASB17Q8WXJ9 295 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 RORBQ92753 470 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 DVL3Q92997 716 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-216ENST00000575599 GAL3ST1Q99999 423 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 ADAT1Q9BUB4 502 aaKnown RBP11.19□□□□□ -0.62
RPAIN-216ENST00000575599 ALG8Q9BVK2 526 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 OR10A2Q9H208 303 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 OPA3Q9H6K4 179 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 GCM1Q9NP62 436 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 ERVK13-1Q9NX77 482 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 COPS3Q9UNS2 423 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 NPTNQ9Y639 398 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 SONP18583 2426 aaKnown RBP11.19□□□□□ -0.62
RPAIN-216ENST00000575599 MALRD1Q5VYJ5 2156 aa11.19□□□□□ -0.62
RPAIN-216ENST00000575599 A0A1W2PQL4 384 aaPredicted RBP11.18□□□□□ -0.62
RPAIN-216ENST00000575599 FAM157AC9JC47 383 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 MAP2K4P45985 399 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 ETV1P50549 477 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 PSMA6P60900 246 aaKnown RBP11.18□□□□□ -0.62
RPAIN-216ENST00000575599 GALEQ14376 348 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 MED22Q15528 200 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 NEDD8Q15843 81 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 RNLSQ5VYX0 342 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 KCTD18Q6PI47 426 aaPredicted RBP11.18□□□□□ -0.62
RPAIN-216ENST00000575599 PLEKHG7Q6ZR37 379 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 MOGAT3Q86VF5 341 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 RFLNBQ8N5W9 214 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 FCGR1BQ92637 280 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 SPSB4Q96A44 273 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 SGK3Q96BR1 496 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 JAM3Q9BX67 310 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF665Q9H7R5 613 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF319Q9P2F9 582 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 IKZF2Q9UKS7 526 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 NF1P21359 2839 aa11.18□□□□□ -0.62
RPAIN-216ENST00000575599 PRR32B1ATL7 298 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 B4DSR2 109 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 J3QLW9 94 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 J3QRE1 110 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 CYB5R3P00387 301 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-216ENST00000575599 KRT8P05787 483 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 HSMCR30P0CW71 290 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF19P17023 458 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 LMO4P61968 165 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 FAM3AP98173 230 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 EMX1Q04741 257 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-216ENST00000575599 TBCEQ15813 527 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-216ENST00000575599 CHRFAM7AQ494W8 412 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 PRAMEF6Q5VXH4 476 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF322Q6U7Q0 402 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-216ENST00000575599 IL17RELQ6ZVW7 336 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 RAB39BQ96DA2 213 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 SIGLEC11Q96RL6 698 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 MROQ9BYG7 248 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 SLC22A4Q9H015 551 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 SHARPINQ9H0F6 387 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms