RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 UBBP0CG47 229 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 PRF1P14222 555 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF708P17019 499 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 MEOX1P50221 254 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 PSG4Q00888 419 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 SCGB2B2Q4G0G5 96 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 TSPO2Q5TGU0 170 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 GLRX5Q86SX6 157 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 SPICQ8N5J4 248 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 DEFB124Q8NES8 71 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 C10orf35Q96D05 121 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 IFT46Q9NQC8 304 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 CA10Q9NS85 328 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 TIMM10BQ9Y5J6 103 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 IGKV3D-15A0A087WSY6 115 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 A0A0A6YYD4 124 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 ARGFXA6NJG6 315 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 KLRC4-KLRK1H3BQV0 150 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 TSC22D2O75157 780 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 SYNGR4O95473 234 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 LCATP04180 440 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 ITGB2P05107 769 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 PTGFRP43088 359 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 PCBD1P61457 104 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 HGFACQ04756 655 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 NKPD1Q17RQ9 610 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 C4orf46Q504U0 113 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 RNASE10Q5GAN6 216 aaKnown RBP12.28□□□□□ -0.44
VPS33B-208ENST00000574755 OR52W1Q6IF63 320 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 Q6ZSR3 168 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 RTN4RL2Q86UN3 420 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 CD163Q86VB7 1156 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 SKA3Q8IX90 412 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 CCDC54Q8NEL0 328 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 SEMA6DQ8NFY4 1073 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 RAB3CQ96E17 227 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 SLC25A21Q9BQT8 299 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-208ENST00000574755 CST11Q9H112 138 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 PARD6AQ9NPB6 346 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF224Q9NZL3 707 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 MCTS1Q9ULC4 181 aaKnown RBP12.28□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF407Q9C0G0 2248 aa12.28□□□□□ -0.44
VPS33B-208ENST00000574755 OR6C6A6NF89 314 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 SOCS1O15524 211 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 NME2P1O60361 137 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 FARS2O95363 451 aaKnown RBP12.27□□□□□ -0.44
VPS33B-208ENST00000574755 FCGR2AP12318 317 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 NME2P22392 152 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 MEF2DQ14814 521 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 FAM189A2Q15884 450 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 UXS1Q8NBZ7 420 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 MDS2Q8NDY4 140 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 PIGTQ969N2 578 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 REEP6Q96HR9 211 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 URM1Q9BTM9 101 aaKnown RBP12.27□□□□□ -0.44
VPS33B-208ENST00000574755 PRRG4Q9BZD6 226 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 OR2H1Q9GZK4 316 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 POFUT1Q9H488 388 aa12.27□□□□□ -0.44
VPS33B-208ENST00000574755 DNAJC13O75165 2243 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 TMEM82A0PJX8 343 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 DISC1C4P0D8 188 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF735P0CB33 412 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 GNG2P59768 71 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 TMED4Q7Z7H5 227 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 TUSC5Q8IXB3 177 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 FGFBP3Q8TAT2 258 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 FNDC9Q8TBE3 224 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 TNFAIP8L1Q8WVP5 186 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 S100A13Q99584 98 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 SLC6A7Q99884 636 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 CHST6Q9GZX3 395 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 CALHM2Q9HA72 323 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 KCNK7Q9Y2U2 307 aa12.27□□□□□ -0.45
VPS33B-208ENST00000574755 OTOGLQ3ZCN5 2332 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 SPAARA0A1B0GVQ0 90 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 ALX3O95076 343 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 FTH1P19P0C7X4 201 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 CD46P15529 392 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 UBE2MP61081 183 aaKnown RBP12.26□□□□□ -0.45
VPS33B-208ENST00000574755 PPIAP62937 165 aaKnown RBP12.26□□□□□ -0.45
VPS33B-208ENST00000574755 PLAC9Q5JTB6 97 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 CRIP3Q6Q6R5 217 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 C1QL2Q7Z5L3 287 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 MUC20Q8N307 709 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-208ENST00000574755 OR56B1Q8NGI3 324 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 CCDC107Q8WV48 283 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 HAS2Q92819 552 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 WNT5BQ9H1J7 359 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 SLC7A10Q9NS82 523 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 PARPBPQ9NWS1 579 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 EIF3KQ9UBQ5 218 aaKnown RBP12.26□□□□□ -0.45
VPS33B-208ENST00000574755 GHRLQ9UBU3 117 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 GSTP1P09211 210 aaKnown RBP12.26□□□□□ -0.45
VPS33B-208ENST00000574755 HIST1H1DP16402 221 aaKnown RBP12.26□□□□□ -0.45
VPS33B-208ENST00000574755 SERPINA2P20848 420 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 ACKR3P25106 362 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-208ENST00000574755 PRSS12P56730 875 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 CXADRP78310 365 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms