RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 ZNF608Q9ULD9 1512 aaPredicted RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 PALLDQ8WX93 1383 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 SMIM26A0A096LP01 95 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 IGHV1-69DA0A0B4J2H0 117 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 A0A1B0GX12 115 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 EPOPA6NHQ4 379 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 ZFP92A6NM28 416 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 GJE1A6NN92 205 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 C9J4A7 227 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 J3QLI3 93 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 J3QT63 122 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 CDIPTO14735 213 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 MYL12BO14950 172 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 RAD1O60671 282 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 SUPT3HO75486 399 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 GLSO94925 669 aaPredicted RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 SEMA3DO95025 777 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 MPZL1O95297 269 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 PSMG1O95456 288 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 MOSP00540 346 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 ORM1P02763 201 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 CTSLP07711 333 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 MMP7P09237 267 aaPredicted RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 GIG44P09565 113 aaPredicted RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 OCM2P0CE71 109 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 LIMS3P0CW19 117 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 LIMS4P0CW20 117 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 CRISP2P16562 243 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 HLA-DMAP28067 261 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 HTR1EP28566 365 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 HOXA9P31269 272 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TALDO1P37837 337 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 HAAOP46952 286 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 RPL14P50914 215 aaKnown RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 CDKN2DP55273 166 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 RAB38P57729 211 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 OR10A3P58181 314 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TAS2R31P59538 309 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TAS2R46P59540 309 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 RHOAP61586 193 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 GINS1Q14691 196 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TOMM34Q15785 309 aaPredicted RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 KRTAP27-1Q3LI81 207 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 PIGGQ5H8A4 983 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TCEAL5Q5H9L2 206 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 COQ5Q5HYK3 327 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 OR10J3Q5JRS4 329 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 HES5Q5TA89 166 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 HHATQ5VTY9 493 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 SDHAF4Q5VUM1 108 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 KHDRBS2Q5VWX1 349 aaKnown RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 NIPAL1Q6NVV3 410 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 FBXW12Q6X9E4 464 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 USP50Q70EL3 339 aaPredicted RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 SLC34A3Q8N130 599 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 CYP4Z2PQ8N1L4 340 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 STPG2Q8N412 459 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 C20orf203Q8NBC4 194 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 LFNGQ8NES3 379 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 NPBQ8NG41 125 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 OR4K17Q8NGC6 315 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 OR4K2Q8NGD2 314 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 OR8J2Q8NGG1 315 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 OR51Q1Q8NH59 317 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 OR6X1Q8NH79 312 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 OR1S1Q8NH92 325 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 OR2AE1Q8NHA4 323 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TYMSOSQ8TAI1 123 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 NT5CQ8TCD5 201 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TCEAL3Q969E4 200 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 RERGQ96A58 199 aaPredicted RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 DCPSQ96C86 337 aaKnown RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 WDR34Q96EX3 536 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 CHMP6Q96FZ7 201 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 FAM19A4Q96LR4 140 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 PLEKHF1Q96S99 279 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 HBEGFQ99075 208 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TEAD3Q99594 435 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 NSRP1Q9H0G5 558 aaKnown RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 PARP12Q9H0J9 701 aaKnown RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 SPNS1Q9H2V7 528 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 PSTPIP2Q9H939 334 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 RDH14Q9HBH5 336 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TMEM27Q9HBJ8 222 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 EXOSC4Q9NPD3 245 aaKnown RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 C12orf4Q9NQ89 552 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TMEM100Q9NV29 134 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 PLEKHJ1Q9NW61 149 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 TMEM9Q9P0T7 183 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 HMGXB4Q9UGU5 601 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 CD84Q9UIB8 345 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 ANXA10Q9UJ72 324 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 NDRG2Q9UN36 371 aaKnown RBP1.52□□□□□ -2.17
CHD3-217ENST00000574022 PSG8Q9UQ74 426 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 LRRK1Q38SD2 2015 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 CHD4Q14839 1912 aa1.52□□□□□ -2.17
CHD3-217ENST00000574022 PLB1Q6P1J6 1458 aa1.51□□□□□ -2.17
CHD3-217ENST00000574022 MAP3K5Q99683 1374 aa1.51□□□□□ -2.17
CHD3-217ENST00000574022 IGKV3D-15A0A087WSY6 115 aa1.51□□□□□ -2.17
CHD3-217ENST00000574022 TRAV8-6A0A0B4J262 113 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms