RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 OR2J1Q9GZK6 312 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 NGBQ9NPG2 151 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 COMMD3Q9UBI1 195 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 KCNN3Q9UGI6 736 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 NDRG3Q9UGV2 375 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 STEAP1Q9UHE8 339 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 CMAHPQ9Y471 501 aa11.78□□□□□ -0.52
CCDC40-209ENST00000573474 IGKV1-9A0A0C4DH69 117 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 CD300LBA8K4G0 201 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 SLC17A2O00624 439 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 RGS5O15539 181 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 CST4P01036 141 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 NRASP01111 189 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 PRB1P04280 392 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 OCMP0CE72 109 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-209ENST00000573474 CALCBP10092 127 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 PRF1P14222 555 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 SELEP16581 610 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 PRKACBP22694 351 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 RANBP1P43487 201 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 SORDQ00796 357 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 CNN3Q15417 329 aaKnown RBP11.77□□□□□ -0.53
CCDC40-209ENST00000573474 RAB11BQ15907 218 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 C1orf100Q5SVJ3 147 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 SPATA46Q5T0L3 261 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 LYPD6Q86Y78 171 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 FTMTQ8N4E7 242 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-209ENST00000573474 JAGN1Q8N5M9 183 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 OR52N4Q8NGI2 321 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 ZNF671Q8TAW3 534 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 S100ZQ8WXG8 99 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 HAVCR1Q96D42 359 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 MARS2Q96GW9 593 aaKnown RBP11.77□□□□□ -0.53
CCDC40-209ENST00000573474 ZC3HAV1LQ96H79 300 aaKnown RBP11.77□□□□□ -0.53
CCDC40-209ENST00000573474 CEP19Q96LK0 163 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 TECTBQ96PL2 329 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 UQCC2Q9BRT2 126 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 ABCB9Q9NP78 766 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 GPR173Q9NS66 373 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 RHBDD3Q9Y3P4 386 aa11.77□□□□□ -0.53
CCDC40-209ENST00000573474 EPG5Q9HCE0 2579 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 HCKP08631 526 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 SNRPBP14678 240 aaKnown RBP11.76□□□□□ -0.53
CCDC40-209ENST00000573474 ERVS71-1P61550 626 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 ESPL1Q14674 2120 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 CDSNQ15517 529 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 ZNF718Q3SXZ3 478 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 OR2T2Q6IF00 324 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 FAM166AQ6J272 317 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 MOB3CQ70IA8 216 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 OR6M1Q8NGM8 313 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 TRMT10AQ8TBZ6 339 aaKnown RBP11.76□□□□□ -0.53
CCDC40-209ENST00000573474 UBASH3BQ8TF42 649 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 PIGCQ92535 297 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 SPSB1Q96BD6 273 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 WDFY2Q96P53 400 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 SORCS2Q96PQ0 1159 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 MIXL1Q9H2W2 232 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 METTL17Q9H7H0 456 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-209ENST00000573474 CGGBP1Q9UFW8 167 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-209ENST00000573474 ADAM30Q9UKF2 790 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 SPATA2Q9UM82 520 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 SLC7A11Q9UPY5 501 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 PCNX1Q96RV3 2341 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 NBASA2RRP1 2371 aa11.76□□□□□ -0.53
CCDC40-209ENST00000573474 A0A0B4J203 849 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 ANKRD30BLA7E2S9 258 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 ZNF850A8MQ14 1090 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 HPGDSO60760 199 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 CLDN14O95500 239 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 PAHP00439 452 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 INHBBP09529 407 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 AZGP1P25311 298 aaKnown RBP11.75□□□□□ -0.53
CCDC40-209ENST00000573474 HTR2CP28335 458 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 GCH1P30793 250 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 TNFSF8P32971 234 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 GLRXP35754 106 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 ZNF93P35789 620 aaPredicted RBP11.75□□□□□ -0.53
CCDC40-209ENST00000573474 CAPZA1P52907 286 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 SCAND1P57086 179 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 PSG7Q13046 419 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 RIN1Q13671 783 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 P2RY14Q15391 338 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 MBNL2Q5VZF2 373 aaKnown RBP11.75□□□□□ -0.53
CCDC40-209ENST00000573474 PLCXD3Q63HM9 321 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 CCDC190Q86UF4 302 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 LAX1Q8IWV1 398 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 KLF14Q8TD94 323 aaPredicted RBP11.75□□□□□ -0.53
CCDC40-209ENST00000573474 SSC4DQ8WTU2 575 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 ITLN2Q8WWU7 325 aaPredicted RBP11.75□□□□□ -0.53
CCDC40-209ENST00000573474 SLC25A28Q96A46 364 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 CMTM3Q96MX0 182 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 PAPOLGQ9BWT3 736 aaKnown RBP11.75□□□□□ -0.53
CCDC40-209ENST00000573474 LIN7BQ9HAP6 207 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 HMG20AQ9NP66 347 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 AKIP1Q9NQ31 210 aa11.75□□□□□ -0.53
CCDC40-209ENST00000573474 MRPL15Q9P015 296 aaKnown RBP11.75□□□□□ -0.53
CCDC40-209ENST00000573474 OR5V1Q9UGF6 321 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms