RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 KDELR2P33947 212 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 RBM34P42696 430 aaKnown RBP3.23□□□□□ -1.89
NUP88-202ENST00000570937 RPS5P46782 204 aaKnown RBP3.23□□□□□ -1.89
NUP88-202ENST00000570937 TAS2R41P59536 307 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 HOXC5Q00444 222 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 MS4A2Q01362 244 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 IL1RL1Q01638 556 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 LIPEQ05469 1076 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 PAX8Q06710 450 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 BNIP2Q12982 314 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 PMS2P3Q13401 168 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 OR1Q1Q15612 314 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 OR7A5Q15622 319 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 DUSP7Q16829 419 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CYBRD1Q53TN4 286 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 TFAP2EQ6VUC0 442 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 BHLHA15Q7RTS1 189 aaPredicted RBP3.23□□□□□ -1.89
NUP88-202ENST00000570937 KRT74Q7RTS7 529 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 AAED1Q7RTV5 226 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 HDDC2Q7Z4H3 204 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 PIGWQ7Z7B1 504 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CYP4Z1Q86W10 505 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CALHM3Q86XJ0 350 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CDC20BQ86Y33 519 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CCDC36Q8IYA8 594 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 MICU2Q8IYU8 434 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 SPAG16Q8N0X2 631 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 GABRG1Q8N1C3 465 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CCDC197Q8NCU1 140 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 C11orf45Q8TAV5 145 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 LINC01560Q8TB33 94 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ADAMTS16Q8TE57 1224 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 FAM162AQ96A26 154 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 TMEM45BQ96B21 275 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 TAMM41Q96BW9 452 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 TPD52L3Q96J77 140 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 RADILQ96JH8 1075 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 LURAP1Q96LR2 239 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 WFIKKN1Q96NZ8 548 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 OXGR1Q96P68 337 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CCT8L2Q96SF2 557 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 MCHR1Q99705 422 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ARHGDIGQ99819 225 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 TMEM43Q9BTV4 400 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ACTR6Q9GZN1 396 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 FAIMQ9NVQ4 179 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ADA2Q9NZK5 511 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 FAM32AQ9Y421 112 aaKnown RBP3.23□□□□□ -1.89
NUP88-202ENST00000570937 SETXQ7Z333 2677 aaKnown RBP3.23□□□□□ -1.89
NUP88-202ENST00000570937 NUP214P35658 2090 aaPredicted RBP3.23□□□□□ -1.89
NUP88-202ENST00000570937 NCOA6Q14686 2063 aaPredicted RBP3.23□□□□□ -1.89
NUP88-202ENST00000570937 NCKAP5O14513 1909 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ICE1Q9Y2F5 2266 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 SPTBN1Q01082 2364 aaKnown RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 CPSF4LA6NMK7 179 aaKnown RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 ZNF716A6NP11 495 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 FTCDNL1E5RQL4 147 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 FXYD1O00168 92 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 CXCR6O00574 342 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 NPIPB7O75200 414 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 GCM2O75603 506 aaPredicted RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 OR5F1O95221 314 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 OPN1SWP03999 348 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 UMPSP11172 480 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 NR2C1P13056 603 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 CD1EP15812 388 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 CRYGSP22914 178 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 HTR2AP28223 471 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 GRPRP30550 384 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 GZMMP51124 257 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 SLC7A2P52569 658 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 GTF2A1P52655 376 aaPredicted RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 SH3BGRP55822 239 aaPredicted RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 SMIM11AP58511 58 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 PRPS1P60891 318 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 PSME3P61289 254 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 ST3GAL3Q11203 375 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 TMED1Q13445 227 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 SELPLGQ14242 412 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 SLC17A1Q14916 467 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 OPCMLQ14982 345 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 PPA1Q15181 289 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 NRF1Q16656 503 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 ANKDD1AQ495B1 522 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 LRRC23Q53EV4 343 aaPredicted RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 IFI44LQ53G44 452 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 BEX5Q5H9J7 111 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 SAMD4BQ5PRF9 694 aaKnown RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 TIMM23BQ5SRD1 257 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 CST9LP1Q5W188 147 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 CASP12Q6UXS9 341 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 STAC2Q6ZMT1 411 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 NUFIP2Q7Z417 695 aaKnown RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 CARM1Q86X55 608 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 PGAM4Q8N0Y7 254 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 C10orf111Q8N326 155 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 GPR137CQ8N3F9 429 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 C17orf78Q8N4C9 275 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 TMEM99Q8N816 258 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 AQP11Q8NBQ7 271 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms