RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 RAD52P43351 418 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 STARP49675 285 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 VEGFCP49767 419 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 LHX2P50458 406 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 CLDN18P56856 261 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 OC90Q02509 493 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-213ENST00000569687 SCRN3Q0VDG4 424 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 UNC119Q13432 240 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 MEF2DQ14814 521 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 PPA1Q15181 289 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ZMYND11Q15326 602 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 RBMS2Q15434 407 aaKnown RBP4.71□□□□□ -1.66
SF3B3-213ENST00000569687 OR1C1Q15619 314 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 MPPED2Q15777 294 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ANKRD39Q53RE8 183 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 HES3Q5TGS1 186 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF626Q68DY1 528 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 OR10K2Q6IF99 312 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 CRIP3Q6Q6R5 217 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 IGF2-ASQ6U949 168 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ASCL4Q6XD76 172 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF782Q6ZMW2 699 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-213ENST00000569687 C20orf204Q6ZNR8 217 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 Q6ZTK2 550 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ASCL5Q7RTU5 278 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 SLC16A14Q7RTX9 510 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 NAA40Q86UY6 237 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 DTX1Q86Y01 620 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF100Q8IYN0 542 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 GALNT16Q8N428 558 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 C9orf62Q8N4C0 152 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 MDS2Q8NDY4 140 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 OR4C16Q8NGL9 310 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 OR10R2Q8NGX6 335 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 OR1F12Q8NHA8 337 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ROBO4Q8WZ75 1007 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 HAS2Q92819 552 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 GCDHQ92947 438 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-213ENST00000569687 LYZL4Q96KX0 146 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 GPR137Q96N19 417 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 SIGLEC12Q96PQ1 595 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 BEX2Q9BXY8 128 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 TMPRSS13Q9BYE2 586 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ULBP2Q9BZM5 246 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF436Q9C0F3 470 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-213ENST00000569687 LPAR5Q9H1C0 372 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 OR10A2Q9H208 303 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 RGCCQ9H4X1 137 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 IFT22Q9H7X7 185 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 BCO1Q9HAY6 547 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 GPR35Q9HC97 309 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 DLL4Q9NR61 685 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 NKIRAS2Q9NYR9 191 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 PIPOXQ9P0Z9 390 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 IL17BQ9UHF5 180 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ATPIF1Q9UII2 106 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 PCSK5Q92824 1860 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 KIF26BQ2KJY2 2108 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 C5orf63A6NC05 138 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CEACAM18A8MTB9 384 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 FOXI3A8MTJ6 420 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF736B4DX44 427 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 DISC1C4P0D8 188 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 F5H5K5 113 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 M0R135 149 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SHOXO15266 292 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 TMPRSS2O15393 492 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SGCEO43556 437 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SSNA1O43805 119 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 NME2P1O60361 137 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CREBL2O60519 120 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF780AO75290 641 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 RAB3DO95716 219 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ACTL6AO96019 429 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CYB5AP00167 134 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CD3DP04234 171 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 MMP7P09237 267 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 GIPP09681 153 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 FTH1P19P0C7X4 201 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 GSTT2P0CG29 244 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 VSIG10L2P0DP72 767 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 COX5BP10606 129 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF708P17019 499 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 HLA-GP17693 338 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 PRKACBP22694 351 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 PTGFRP43088 359 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CBX5P45973 191 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM50BP56557 158 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZP1P60852 638 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 RAP2BP61225 183 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 PSG4Q00888 419 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 DHODHQ02127 395 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SRSF4Q08170 494 aaKnown RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SLC10A1Q14973 349 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ARL6IP1Q15041 203 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 KISS1Q15726 138 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 UBE2V2Q15819 145 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 GFOD2Q3B7J2 385 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 MOGAT2Q3SYC2 334 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 C4orf46Q504U0 113 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms