RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 PTHLHP12272 177 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 OR3A4PP47883 348 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 SRP9P49458 86 aaKnown RBP19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 PRSS12P56730 875 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 GPR176Q14439 515 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 KISS1Q15726 138 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 C1orf185Q5T7R7 199 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 AWAT2Q6E213 333 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 CD163Q86VB7 1156 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 CADM3Q8N126 398 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 FAM57AQ8TBR7 257 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 APOBEC3DQ96AK3 386 aaPredicted RBP19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 ITPKCQ96DU7 683 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 MS4A3Q96HJ5 214 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 MYEF2Q9P2K5 600 aaKnown RBP19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 RAB22AQ9UL26 194 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 MRPS28Q9Y2Q9 187 aaKnown RBP19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 A0A0A6YYH2 397 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 A6NJ64 397 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 TMEM14DPA8MWL7 114 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 ORC5O43913 435 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 SERPINA5P05154 406 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 CCNOP22674 350 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 PMPCAQ10713 525 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 KLF9Q13886 244 aaPredicted RBP19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 DMRTC1Q5HYR2 192 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 C1orf162Q8NEQ5 155 aaPredicted RBP19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 GDNFP39905 211 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 TOMM5Q8N4H5 51 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 DUSP18Q8NEJ0 188 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 UBASH3BQ8TF42 649 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 NPRL2Q8WTW4 380 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 FCAMRQ8WWV6 532 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 SPSB1Q96BD6 273 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 REPIN1Q9BWE0 567 aaKnown RBP19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 CACNG2Q9Y698 323 aa19.51■□□□□ 0.71
VCPKMT-205ENST00000569518 PIEZO2Q9H5I5 2752 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 TRAV18A0A075B6X5 111 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 MEIOCA2RUB1 952 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 GMDSO60547 372 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 FAM87AP0C7U9 286 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 ZNF14P17017 642 aaPredicted RBP19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 ALDH3B1P43353 468 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 RANBP1P43487 201 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 PER3P56645 1201 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 EIF2S3LQ2VIR3 472 aaKnown RBP19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 ZBTB37Q5TC79 503 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 GLIPR1L1Q6UWM5 242 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 KRT74Q7RTS7 529 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 OR2W3Q7Z3T1 314 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 RPRMLQ8N4K4 120 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 NAXEQ8NCW5 288 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 ENKURQ8TC29 256 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 PHF21AQ96BD5 680 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 GPR173Q9NS66 373 aa19.5■□□□□ 0.71
VCPKMT-205ENST00000569518 BSNQ9UPA5 3926 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 NAT2P11245 290 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 HOXB1P14653 301 aaPredicted RBP19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 BTCP35070 178 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 APLNRP35414 380 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 WNT5AP41221 380 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 CXADRP78310 365 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 GK2Q14410 553 aaPredicted RBP19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 CLVS2Q5SYC1 327 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 CISD2Q8N5K1 135 aaKnown RBP19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 GPER1Q99527 375 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 SLX1AQ9BQ83 275 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 MMP28Q9H239 520 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 PROCRQ9UNN8 238 aa19.49■□□□□ 0.71
VCPKMT-205ENST00000569518 NGFP01138 241 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 UBBP0CG47 229 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 SLC6A1P30531 599 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 TIMP3P35625 211 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 UBE2NP61088 152 aaKnown RBP19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 LINC00303Q3SY05 128 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 MOGAT2Q3SYC2 334 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 ZNF610Q8N9Z0 462 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 SLC30A7Q8NEW0 376 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 PIGTQ969N2 578 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 KLK11Q9UBX7 282 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 RAB27BO00194 218 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 HOXD4P09016 255 aaPredicted RBP19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 PTGFRP43088 359 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 DYRK1AQ13627 763 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 MYPOPQ86VE0 399 aaPredicted RBP19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 ZNF101Q8IZC7 436 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 PNLDC1Q8NA58 520 aaKnown RBP19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 FAM46BQ96A09 425 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 OPN3Q9H1Y3 402 aaPredicted RBP19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 STARD10Q9Y365 291 aa19.48■□□□□ 0.71
VCPKMT-205ENST00000569518 ZNF816-ZNF321PA0A0X1KG74 233 aa19.47■□□□□ 0.71
VCPKMT-205ENST00000569518 FAM240BA0A1B0GVZ2 78 aa19.47■□□□□ 0.71
VCPKMT-205ENST00000569518 CNN3Q15417 329 aaKnown RBP19.47■□□□□ 0.71
VCPKMT-205ENST00000569518 TSC22D1Q15714 1073 aa19.47■□□□□ 0.71
VCPKMT-205ENST00000569518 GLCCI1Q86VQ1 547 aa19.47■□□□□ 0.71
VCPKMT-205ENST00000569518 TMEM104Q8NE00 496 aa19.47■□□□□ 0.71
VCPKMT-205ENST00000569518 GAL3ST1Q99999 423 aa19.47■□□□□ 0.71
VCPKMT-205ENST00000569518 C7orf50Q9BRJ6 194 aaKnown RBP19.47■□□□□ 0.71
VCPKMT-205ENST00000569518 TUBD1Q9UJT1 453 aa19.47■□□□□ 0.71
VCPKMT-205ENST00000569518 MAP1BP46821 2468 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms