RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 ACTC1P68032 377 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 ACTA1P68133 377 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 SLC34A1Q06495 639 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 SLC3A1Q07837 685 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 TP53I3Q53FA7 332 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 BCL2L15Q5TBC7 163 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 CYB5R2Q6BCY4 276 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 LAIR2Q6ISS4 152 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 KLBQ86Z14 1044 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 ELMOD2Q8IZ81 293 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 PRSS35Q8N3Z0 413 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 YIPF7Q8N8F6 280 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 PLPP7Q8NBV4 271 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 ZNF555Q8NEP9 628 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 CSNK2A3Q8NEV1 391 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 CNIH3Q8TBE1 160 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 OR51E1Q8TCB6 317 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 CYGBQ8WWM9 190 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 HPSE2Q8WWQ2 592 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 RAB1CQ92928 201 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 ITPKCQ96DU7 683 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 TIMD4Q96H15 378 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 Q96MT0 163 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 ZNF665Q9H7R5 613 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 MRPS18AQ9NVS2 196 aaKnown RBP8.24□□□□□ -1.09
CLK3-220ENST00000567992 SLC22A13Q9Y226 551 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 NOP16Q9Y3C1 178 aaKnown RBP8.24□□□□□ -1.09
CLK3-220ENST00000567992 SNX5Q9Y5X3 404 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 SNTNA6NMZ2 147 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 A8MV72 311 aaPredicted RBP8.23□□□□□ -1.09
CLK3-220ENST00000567992 H0YAE9 185 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 FAM20BO75063 409 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 RPP14O95059 124 aaKnown RBP8.23□□□□□ -1.09
CLK3-220ENST00000567992 THBS2P35442 1172 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 CAPGP40121 348 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 PSMB10P40306 273 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 VHLP40337 213 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 KIR3DL2P43630 455 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 IL5RAQ01344 420 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 RAB40BQ12829 278 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 PRDX4Q13162 271 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 IL18R1Q13478 541 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 TMEM155Q4W5P6 130 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 WDR38Q5JTN6 314 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 FAM201AQ5SY85 155 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 TTC23Q5W5X9 447 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 C11orf53Q8IXP5 236 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 DHRSXQ8N5I4 330 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 ACBD7Q8N6N7 88 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 LINC01356Q8N9X3 169 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 SPERTQ8NA61 448 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 OR52I1Q8NGK6 324 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 FBLIM1Q8WUP2 373 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 ERGIC1Q969X5 290 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 FAM71F1Q96KD3 344 aaPredicted RBP8.23□□□□□ -1.09
CLK3-220ENST00000567992 PAPOLGQ9BWT3 736 aaKnown RBP8.23□□□□□ -1.09
CLK3-220ENST00000567992 JAM3Q9BX67 310 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 TLNRD1Q9H1K6 362 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 YAE1D1Q9NRH1 226 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 UFSP2Q9NUQ7 469 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 GNG8Q9UK08 70 aa8.23□□□□□ -1.09
CLK3-220ENST00000567992 JMJD1CQ15652 2540 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ZNF816-ZNF321PA0A0X1KG74 233 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 DAPL1A0PJW8 107 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ISPDA4D126 451 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ZNF850A8MQ14 1090 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 F5H0A9 414 aaPredicted RBP8.22□□□□□ -1.09
CLK3-220ENST00000567992 IFNL4K9M1U5 179 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 P2RY10O00398 339 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 DHRS3O75911 302 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ZNF205O95201 554 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 FSTL3O95633 263 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 RPSAP08865 295 aaKnown RBP8.22□□□□□ -1.09
CLK3-220ENST00000567992 LIMS3P0CW19 117 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 LIMS4P0CW20 117 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ATP6V1B1P15313 513 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 FAHP16930 419 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 EGR1P18146 543 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 AQP4P55087 323 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 RIPPLY3P57055 190 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 OR12D2P58182 307 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 NANOS3P60323 173 aaKnown RBP8.22□□□□□ -1.09
CLK3-220ENST00000567992 CSNK2BP67870 215 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ZNF154Q13106 437 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ZBTB37Q5TC79 503 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 TMEM42Q69YG0 159 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 FDX2Q6P4F2 183 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ZNF826PQ6ZT77 177 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 LRRC28Q86X40 367 aaPredicted RBP8.22□□□□□ -1.09
CLK3-220ENST00000567992 SEMA6DQ8NFY4 1073 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 OR1M1Q8NGA1 313 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 OR14K1Q8NGZ2 314 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 OR5P3Q8WZ94 311 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 TFAP2CQ92754 450 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ITFG2Q969R8 447 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 PELI1Q96FA3 418 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 POM121Q96HA1 1249 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 MYCBPQ99417 103 aaPredicted RBP8.22□□□□□ -1.09
CLK3-220ENST00000567992 GAL3ST1Q99999 423 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ALG8Q9BVK2 526 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms