RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 WFDC11Q8NEX6 87 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 OR2G2Q8NGZ5 317 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 HPS1Q92902 700 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 LYZL4Q96KX0 146 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 OR2V2Q96R30 315 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 FKBP14Q9NWM8 211 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 C14orf119Q9NWQ9 140 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 ENPP5Q9UJA9 477 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 SLC22A13Q9Y226 551 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 ERGIC3Q9Y282 383 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 CREBBPQ92793 2442 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 LOC107986453A0A1B0GWG9 222 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 TMEM212A6NML5 194 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 CLDN25C9JDP6 229 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 P2RY10O00398 339 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 SYT7O43581 403 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 DENRO43583 198 aaKnown RBP10.33□□□□□ -0.76
SF3B3-208ENST00000567250 LILRA1O75019 489 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 CDK1P06493 297 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 CCL1P22362 96 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 CD200P41217 278 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 TGM4P49221 684 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 ETV1P50549 477 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 CDH15P55291 814 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 RIPPLY1Q0D2K3 151 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 ALKBH1Q13686 389 aaKnown RBP10.33□□□□□ -0.76
SF3B3-208ENST00000567250 LAIR2Q6ISS4 152 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 ZDHHC23Q8IYP9 409 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 PLPP7Q8NBV4 271 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 C10orf105Q8TEF2 133 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 ITLN1Q8WWA0 313 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 ERGIC1Q969X5 290 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 C10orf35Q96D05 121 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 MEGF10Q96KG7 1140 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 ZNF649Q9BS31 505 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 RTL8AQ9BWD3 113 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 MND1Q9BWT6 205 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 ISG20L2Q9H9L3 353 aaKnown RBP10.33□□□□□ -0.76
SF3B3-208ENST00000567250 V9GYS6 101 aa10.33□□□□□ -0.76
SF3B3-208ENST00000567250 FLNAP21333 2647 aaKnown RBP10.33□□□□□ -0.76
SF3B3-208ENST00000567250 DYSFO75923 2080 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 LRRC30A6NM36 301 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 PTGES3LE9PB15 166 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 F5H5P2 479 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 RGS10O43665 173 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 CDC14BO60729 498 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 CST4P01036 141 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 HLA-DPB1P04440 258 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 ISG15P05161 165 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 CRHBPP24387 322 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 ACKR3P25106 362 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 GIFP27352 417 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 KIR3DL2P43630 455 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 GATA4P43694 442 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 GPR6P46095 362 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-208ENST00000567250 WNT4P56705 351 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 SLC35A2P78381 396 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 ODF4Q2M2E3 257 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 OR2G6Q5TZ20 316 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 RNLSQ5VYX0 342 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 RPL22L1Q6P5R6 122 aaKnown RBP10.32□□□□□ -0.76
SF3B3-208ENST00000567250 PEG10Q86TG7 708 aaKnown RBP10.32□□□□□ -0.76
SF3B3-208ENST00000567250 C1orf87Q8N0U7 546 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 PRSS35Q8N3Z0 413 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 ZNF676Q8N7Q3 588 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 OR5AK2Q8NH90 309 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 TIMD4Q96H15 378 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 TECTBQ96PL2 329 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 HIST1H2AAQ96QV6 131 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 MICU1Q9BPX6 476 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 HHLA2Q9UM44 414 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 PPP1R3CQ9UQK1 317 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 PIGLQ9Y2B2 252 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 PCDHGB5Q9Y5G0 923 aa10.32□□□□□ -0.76
SF3B3-208ENST00000567250 AKAP9Q99996 3911 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 TRBV2A0A0J9YWF9 115 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 TMEM210A6NLX4 147 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 H0YL77 283 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 GATBO75879 557 aaKnown RBP10.31□□□□□ -0.76
SF3B3-208ENST00000567250 IRF2P14316 349 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 FAHP16930 419 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 EEF1B2P24534 225 aaKnown RBP10.31□□□□□ -0.76
SF3B3-208ENST00000567250 C21orf33P30042 268 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-208ENST00000567250 TMEM33P57088 247 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 NANOS3P60323 173 aaKnown RBP10.31□□□□□ -0.76
SF3B3-208ENST00000567250 GABARAPL2P60520 117 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 PRDX4Q13162 271 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 TNK1Q13470 666 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 CDK5R1Q15078 307 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 CLVS2Q5SYC1 327 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 Q6ZSR3 168 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 OR11L1Q8NGX0 322 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 PIGCQ92535 297 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 PPP1R14AQ96A00 147 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 SMIM19Q96E16 107 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 CDCA4Q9BXL8 241 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 BPESC1Q9GZL8 116 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 DUSP21Q9H596 190 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 FN3KRPQ9HA64 309 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 ZNF275Q9NSD4 429 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms