RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ABHD6Q9BV23 337 aa12.37□□□□□ -0.43
RNF40-209ENST00000566703 DNTTIP1Q9H147 329 aa12.37□□□□□ -0.43
RNF40-209ENST00000566703 TLNRD1Q9H1K6 362 aa12.37□□□□□ -0.43
RNF40-209ENST00000566703 DPAGT1Q9H3H5 408 aa12.37□□□□□ -0.43
RNF40-209ENST00000566703 REEP1Q9H902 201 aa12.37□□□□□ -0.43
RNF40-209ENST00000566703 ABCB9Q9NP78 766 aa12.37□□□□□ -0.43
RNF40-209ENST00000566703 CMC2Q9NRP2 79 aa12.37□□□□□ -0.43
RNF40-209ENST00000566703 MPC1Q9Y5U8 109 aa12.37□□□□□ -0.43
RNF40-209ENST00000566703 IGHV3OR15-7A0A075B7D8 119 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 hCG_38984A0A1B0GV85 526 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 GPR137BO60478 399 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 CLPXO76031 633 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 CLUP10909 449 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 GNALP38405 381 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 TGM4P49221 684 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 GSK3AP49840 483 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 MXRA7P84157 204 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 IL5RAQ01344 420 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 POU4F2Q12837 409 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 CYP2R1Q6VVX0 501 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 GDPGP1Q6ZNW5 385 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 WDR86Q86TI4 376 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 CMTM4Q8IZR5 234 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 SCCPDHQ8NBX0 429 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 OR10Z1Q8NGY1 313 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 LRTOMTQ8WZ04 291 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 ST8SIA4Q92187 359 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 ITFG2Q969R8 447 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 CCL13Q99616 98 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 MICU1Q9BPX6 476 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 OR10A2Q9H208 303 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 ARMC1Q9NVT9 282 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 PDP1Q9P0J1 537 aaPredicted RBP12.36□□□□□ -0.43
RNF40-209ENST00000566703 PRPF19Q9UMS4 504 aaKnown RBP12.36□□□□□ -0.43
RNF40-209ENST00000566703 SAMHD1Q9Y3Z3 626 aaKnown RBP12.36□□□□□ -0.43
RNF40-209ENST00000566703 RNF114Q9Y508 228 aa12.36□□□□□ -0.43
RNF40-209ENST00000566703 TCRBV5S2A0A599 114 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 ANXA2P2A6NMY6 339 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.35□□□□□ -0.43
RNF40-209ENST00000566703 M0QZ24 198 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 NDUFB3O43676 98 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 GLCEO94923 617 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 ATP6V1B2P21281 511 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 GSTT1P30711 240 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 OPRL1P41146 370 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 ZNF121P58317 390 aaPredicted RBP12.35□□□□□ -0.43
RNF40-209ENST00000566703 GUCA2AQ02747 115 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 SRSF4Q08170 494 aaKnown RBP12.35□□□□□ -0.43
RNF40-209ENST00000566703 PPP1R8Q12972 351 aaKnown RBP12.35□□□□□ -0.43
RNF40-209ENST00000566703 TRIM25Q14258 630 aaKnown RBP12.35□□□□□ -0.43
RNF40-209ENST00000566703 FAM98BQ52LJ0 330 aaKnown RBP12.35□□□□□ -0.43
RNF40-209ENST00000566703 KLHL12Q53G59 568 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 FAM76BQ5HYJ3 339 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 WDR38Q5JTN6 314 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 LCN8Q6JVE9 175 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 C1orf122Q6ZSJ8 110 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 FAM57BQ71RH2 274 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 DHFR2Q86XF0 187 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 TIGD4Q8IY51 512 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 OR6N2Q8NGY6 317 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 LINC01006Q8NI28 216 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 C8orf46Q8TAG6 207 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 ZNF319Q9P2F9 582 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 FAM96BQ9Y3D0 163 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 RHBDD3Q9Y3P4 386 aa12.35□□□□□ -0.43
RNF40-209ENST00000566703 A0A0U1RQK1 487 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 TMEM210A6NLX4 147 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 CDIPTO14735 213 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 SOX14O95416 240 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 CST4P01036 141 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 IGHV4-59P01825 116 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 FBP1P09467 338 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 H2BFMP0C1H6 154 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 LRRC10Q5BKY1 277 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 VMO1Q7Z5L0 202 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.34□□□□□ -0.43
RNF40-209ENST00000566703 ERI1Q8IV48 349 aaKnown RBP12.34□□□□□ -0.43
RNF40-209ENST00000566703 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 ZNF454Q8N9F8 522 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 ZSCAN4Q8NAM6 433 aaPredicted RBP12.34□□□□□ -0.43
RNF40-209ENST00000566703 TEX47Q8TBZ9 253 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 ITPKCQ96DU7 683 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 MED30Q96HR3 178 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 PGAM5Q96HS1 289 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 CCT8L2Q96SF2 557 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 DCTN5Q9BTE1 182 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 RTL8AQ9BWD3 113 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 PAPOLGQ9BWT3 736 aaKnown RBP12.34□□□□□ -0.43
RNF40-209ENST00000566703 MMP27Q9H306 513 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 VNN3Q9NY84 501 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 HAO2Q9NYQ3 351 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 ZNF391Q9UJN7 358 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 U3KQV3 271 aa12.34□□□□□ -0.43
RNF40-209ENST00000566703 ARRDC5A6NEK1 342 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 B2RBV5 119 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 ACOT8O14734 319 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 AMY2BP19961 511 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 PAICSP22234 425 aaKnown RBP12.33□□□□□ -0.44
RNF40-209ENST00000566703 EEF1B2P24534 225 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms