RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 DNAL1Q4LDG9 190 aa16.73■□□□□ 0.27
CLN6-207ENST00000566347 SLC35D3Q5M8T2 416 aa16.73■□□□□ 0.27
CLN6-207ENST00000566347 METTL11BQ5VVY1 283 aa16.73■□□□□ 0.27
CLN6-207ENST00000566347 BRD3OSQ6XYD6 125 aa16.73■□□□□ 0.27
CLN6-207ENST00000566347 THEM6Q8WUY1 208 aa16.73■□□□□ 0.27
CLN6-207ENST00000566347 LRRC29Q8WV35 223 aa16.73■□□□□ 0.27
CLN6-207ENST00000566347 PAPOLGQ9BWT3 736 aaKnown RBP16.73■□□□□ 0.27
CLN6-207ENST00000566347 PRDM13Q9H4Q3 707 aa16.73■□□□□ 0.27
CLN6-207ENST00000566347 SMURF1Q9HCE7 757 aa16.73■□□□□ 0.27
CLN6-207ENST00000566347 ABCB9Q9NP78 766 aa16.73■□□□□ 0.27
CLN6-207ENST00000566347 SOX21Q9Y651 276 aaPredicted RBP16.73■□□□□ 0.27
CLN6-207ENST00000566347 MGAM2Q2M2H8 2515 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 ANXA2P2A6NMY6 339 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 TMPRSS2O15393 492 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 GYG2O15488 501 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 SELENOFO60613 162 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 CDK5Q00535 292 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 FLOT2Q14254 428 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 DEFB112Q30KQ8 113 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 KLHL12Q53G59 568 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 WDR86Q86TI4 376 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 SPATA24Q86W54 205 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 C11orf53Q8IXP5 236 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 GALNT4Q8N4A0 578 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 WDFY2Q96P53 400 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 MICU1Q9BPX6 476 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 NIPAL2Q9H841 368 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 NOX4Q9NPH5 578 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 ZNF319Q9P2F9 582 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 ZNF391Q9UJN7 358 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 RHBDD3Q9Y3P4 386 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 MPC1Q9Y5U8 109 aa16.72■□□□□ 0.27
CLN6-207ENST00000566347 MDFIC2A0A1B0GVS7 189 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 DVL1O14640 695 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 HOXA3O43365 443 aaPredicted RBP16.71■□□□□ 0.27
CLN6-207ENST00000566347 SFTPBP07988 381 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 MMP9P14780 707 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 PDCD1Q15116 288 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 C16orf87Q6PH81 154 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 WDR82Q6UXN9 313 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 BTN2A1Q7KYR7 527 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 TRPM8Q7Z2W7 1104 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 CPOQ8IVL8 374 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 C12orf43Q96C57 262 aaKnown RBP16.71■□□□□ 0.27
CLN6-207ENST00000566347 ITPKCQ96DU7 683 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 RTL8AQ9BWD3 113 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 TLNRD1Q9H1K6 362 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 RASSF4Q9H2L5 321 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 DNAJB9Q9UBS3 223 aa16.71■□□□□ 0.27
CLN6-207ENST00000566347 IGHV3OR15-7A0A075B7D8 119 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 POM121CA8CG34 1229 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 SRRM5B3KS81 715 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 PSMA6P60900 246 aaKnown RBP16.7■□□□□ 0.26
CLN6-207ENST00000566347 RPS7P62081 194 aaKnown RBP16.7■□□□□ 0.26
CLN6-207ENST00000566347 CSNK2BP67870 215 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 CBX1P83916 185 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 SLC36A1Q7Z2H8 476 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 HS3ST5Q8IZT8 346 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 GATAD2BQ8WXI9 593 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 DNAJC9Q8WXX5 260 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 ST8SIA4Q92187 359 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 FAM71F1Q96KD3 344 aaPredicted RBP16.7■□□□□ 0.26
CLN6-207ENST00000566347 TBX15Q96SF7 602 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 UNKLQ9H9P5 680 aaKnown RBP16.7■□□□□ 0.26
CLN6-207ENST00000566347 SLC25A19Q9HC21 320 aa16.7■□□□□ 0.26
CLN6-207ENST00000566347 TMEM210A6NLX4 147 aa16.69■□□□□ 0.26
CLN6-207ENST00000566347 CDIPTO14735 213 aa16.69■□□□□ 0.26
CLN6-207ENST00000566347 FKBP6O75344 327 aa16.69■□□□□ 0.26
CLN6-207ENST00000566347 CST4P01036 141 aa16.69■□□□□ 0.26
CLN6-207ENST00000566347 POU4F2Q12837 409 aa16.69■□□□□ 0.26
CLN6-207ENST00000566347 TMEM86BQ8N661 226 aa16.69■□□□□ 0.26
CLN6-207ENST00000566347 SIRPDQ9H106 197 aa16.69■□□□□ 0.26
CLN6-207ENST00000566347 RPUSD1Q9UJJ7 312 aaKnown RBP16.69■□□□□ 0.26
CLN6-207ENST00000566347 LAMP5Q9UJQ1 280 aa16.69■□□□□ 0.26
CLN6-207ENST00000566347 CENPVL3A0A0U1RRI6 287 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 TCRBV3S1A0A5B6 114 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 GPR37O15354 613 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 ALOX5APP20292 161 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 PRKACGP22612 351 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 SLC2A5P22732 501 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 PRDX4Q13162 271 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 WDR38Q5JTN6 314 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 RUSC1-AS1Q66K80 236 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 Q6YL49 198 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 KRT77Q7Z794 578 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 PAPD5Q8NDF8 572 aaKnown RBP16.68■□□□□ 0.26
CLN6-207ENST00000566347 BBS1Q8NFJ9 593 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 OR10Z1Q8NGY1 313 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 OR5P3Q8WZ94 311 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 ITFG2Q969R8 447 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 NRBF2Q96F24 287 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 DMRTB1Q96MA1 342 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 CCL13Q99616 98 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 YIPF3Q9GZM5 350 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 PPP1R3EQ9H7J1 279 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 CNTD2Q9H8S5 307 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 KLHDC2Q9Y2U9 406 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 LRP12Q9Y561 859 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 KPTNQ9Y664 436 aa16.68■□□□□ 0.26
CLN6-207ENST00000566347 IGHV1-69DA0A0B4J2H0 117 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms