RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 TCEAL3Q969E4 200 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 ZNF681Q96N22 645 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 NICN1Q9BSH3 213 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 TSSK6Q9BXA6 273 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 PLA2G12AQ9BZM1 189 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 EGLN3Q9H6Z9 239 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 BCL2L10Q9HD36 194 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 RCC2Q9P258 522 aaKnown RBP9.25□□□□□ -0.93
UBFD1-205ENST00000566136 IKZF2Q9UKS7 526 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 ZNF780BQ9Y6R6 833 aa9.25□□□□□ -0.93
UBFD1-205ENST00000566136 A0A1W2PNV4 684 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 TMEM178BH3BS89 294 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 KPNA4O00629 521 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-205ENST00000566136 KIAA0513O60268 411 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 CTSVO60911 334 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 CEACAM4O75871 244 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 UTS2O95399 124 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 ZNF806P0C7X5 589 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 MPIP34949 423 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 XGP55808 180 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 TAS2R41P59536 307 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 SNRPGP62308 76 aaKnown RBP9.24□□□□□ -0.93
UBFD1-205ENST00000566136 GINS1Q14691 196 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 OXA1LQ15070 435 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 DEFB134Q4QY38 66 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 PAPPA-AS1Q5QFB9 102 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 BHLHB9Q6PI77 547 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 UNQ6126/PRO20091Q6UXV3 157 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 FAM92BQ6ZTR7 304 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 PGAP1Q75T13 922 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 GPALPP1Q8IXQ4 340 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 MORN4Q8NDC4 146 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 KBTBD8Q8NFY9 601 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 FAM222BQ8WU58 562 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 BMFQ96LC9 184 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 OPALINQ96PE5 141 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 MROQ9BYG7 248 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 EXOSC4Q9NPD3 245 aaKnown RBP9.24□□□□□ -0.93
UBFD1-205ENST00000566136 ASCL3Q9NQ33 180 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 LAMP3Q9UQV4 416 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 HEBP2Q9Y5Z4 205 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 ZNF732B4DXR9 585 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 IFNA5P01569 189 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 IRF2P14316 349 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 DDOSTP39656 456 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 PDX1P52945 283 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 CD300CQ08708 224 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 NKAPLQ5M9Q1 402 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 DCAF12Q5T6F0 453 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 ASPHD1Q5U4P2 390 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 NIPAL1Q6NVV3 410 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 PAQR4Q8N4S7 273 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-205ENST00000566136 MMP28Q9H239 520 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 PPP1R3CQ9UQK1 317 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 CHST2Q9Y4C5 530 aa9.24□□□□□ -0.93
UBFD1-205ENST00000566136 THADAQ6YHU6 1953 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 A0A087WUU8 490 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 KBTBD11-OT1A0A1B0GTJ5 212 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 SH2D1BO14796 132 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 HMGN1P05114 100 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 PVRP15151 417 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 RGS1Q08116 209 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 STX4Q12846 297 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 GGNBP1Q5YKI7 109 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 H3F3CQ6NXT2 135 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 LANCL3Q6ZV70 420 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 SCCPDHQ8NBX0 429 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 SLC16A11Q8NCK7 471 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 AP3S1Q92572 193 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 CDS1Q92903 461 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 ATP5SQ99766 215 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 NEURL2Q9BR09 285 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 ANKRD19PQ9H560 264 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 C3orf14Q9HBI5 128 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 PLEK2Q9NYT0 353 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 SIGLEC8Q9NYZ4 499 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 CLN8Q9UBY8 286 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 MRPS28Q9Y2Q9 187 aaKnown RBP9.23□□□□□ -0.93
UBFD1-205ENST00000566136 V9GYY9 64 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 ACACBO00763 2458 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 PNMA8CA0A1B0GUJ8 204 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 LDOC1O95751 146 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-205ENST00000566136 PIPP12273 146 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-205ENST00000566136 UGT2B7P16662 529 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 P2RY1P47900 373 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 SOX2P48431 317 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 RELAQ04206 551 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 CLEC12AQ5QGZ9 265 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 CCNJQ5T5M9 372 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 LINC00299Q6ZSB3 139 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 PRSS41Q7RTY9 318 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 DTX2Q86UW9 622 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 INO80EQ8NBZ0 244 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-205ENST00000566136 OR5R1Q8NH85 324 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 FLVCR1-AS1Q8TAF5 88 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 FGFBP3Q8TAT2 258 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 TMEM80Q96HE8 168 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 AAMDCQ9H7C9 122 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 IFT46Q9NQC8 304 aa9.23□□□□□ -0.93
UBFD1-205ENST00000566136 GSN-AS1Q9NRJ2 163 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms