RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 KCNN3Q9UGI6 736 aa26.29■■□□□ 1.8
CTCF-203ENST00000566078 A0A0B4J203 849 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 IGKV1-9A0A0C4DH69 117 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 HCKP08631 526 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 CD40P25942 277 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 S100A5P33763 92 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 DMRTC1Q5HYR2 192 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 MZT2AQ6P582 158 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 TMEM108Q6UXF1 575 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 NPRL2Q8WTW4 380 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 CD300LBA8K4G0 201 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 SNTB1Q13884 538 aaKnown RBP26.28■■□□□ 1.8
CTCF-203ENST00000566078 TMEM42Q69YG0 159 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 CSNK2A3Q8NEV1 391 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 UBASH3BQ8TF42 649 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 PIGCQ92535 297 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 ITFG2Q969R8 447 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 CMBLQ96DG6 245 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 RHBDD3Q9Y3P4 386 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 CMAHPQ9Y471 501 aa26.28■■□□□ 1.8
CTCF-203ENST00000566078 MAGEB3O15480 346 aa26.27■■□□□ 1.8
CTCF-203ENST00000566078 GMDSO60547 372 aa26.27■■□□□ 1.8
CTCF-203ENST00000566078 NRASP01111 189 aa26.27■■□□□ 1.8
CTCF-203ENST00000566078 SNRPBP14678 240 aaKnown RBP26.27■■□□□ 1.8
CTCF-203ENST00000566078 CLDN12P56749 244 aa26.27■■□□□ 1.8
CTCF-203ENST00000566078 SORDQ00796 357 aa26.27■■□□□ 1.8
CTCF-203ENST00000566078 SNTB2Q13425 540 aaKnown RBP26.27■■□□□ 1.8
CTCF-203ENST00000566078 OR2T2Q6IF00 324 aa26.27■■□□□ 1.8
CTCF-203ENST00000566078 LINC00299Q6ZSB3 139 aa26.27■■□□□ 1.8
CTCF-203ENST00000566078 LAX1Q8IWV1 398 aa26.27■■□□□ 1.8
CTCF-203ENST00000566078 TRMT10AQ8TBZ6 339 aaKnown RBP26.27■■□□□ 1.8
CTCF-203ENST00000566078 ITLN2Q8WWU7 325 aaPredicted RBP26.27■■□□□ 1.8
CTCF-203ENST00000566078 MARS2Q96GW9 593 aaKnown RBP26.27■■□□□ 1.8
CTCF-203ENST00000566078 ATP6V1G2-DDX39BF2Z307 99 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 SLC17A2O00624 439 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 PAHP00439 452 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 AZGP1P25311 298 aaKnown RBP26.26■■□□□ 1.79
CTCF-203ENST00000566078 CNN3Q15417 329 aaKnown RBP26.26■■□□□ 1.79
CTCF-203ENST00000566078 BHLHE23Q8NDY6 225 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 ZNF671Q8TAW3 534 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 SPACA5Q96QH8 159 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 PAPOLGQ9BWT3 736 aaKnown RBP26.26■■□□□ 1.79
CTCF-203ENST00000566078 PPP1R3EQ9H7J1 279 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 LIN7BQ9HAP6 207 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 ABCB9Q9NP78 766 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 CRIM1Q9NZV1 1036 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 ABRACLQ9P1F3 81 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 STEAP1Q9UHE8 339 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 SPEF1Q9Y4P9 236 aa26.26■■□□□ 1.79
CTCF-203ENST00000566078 ALX3O95076 343 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 RAC2P15153 192 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 TUBG1P23258 451 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 PTAFRP25105 342 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 CFPP27918 469 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 TFF3Q07654 80 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 RAB11BQ15907 218 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 C1orf174Q8IYL3 243 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 FTMTQ8N4E7 242 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 KLF14Q8TD94 323 aaPredicted RBP26.25■■□□□ 1.79
CTCF-203ENST00000566078 PIGTQ969N2 578 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 FOXRED1Q96CU9 486 aaPredicted RBP26.25■■□□□ 1.79
CTCF-203ENST00000566078 RADILQ96JH8 1075 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 METTL17Q9H7H0 456 aaPredicted RBP26.25■■□□□ 1.79
CTCF-203ENST00000566078 NGBQ9NPG2 151 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 TUBG2Q9NRH3 451 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 NDRG3Q9UGV2 375 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 GPR160Q9UJ42 338 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 ZNF850A8MQ14 1090 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 TMEM127O75204 238 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 CLDN14O95500 239 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 ALDOBP05062 364 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 CD37P11049 281 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 AGAP20933 346 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 MPV17P39210 176 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 PLCXD3Q63HM9 321 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 XKRXQ6PP77 449 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 LYPD6Q86Y78 171 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 ZNF808Q8N4W9 903 aaPredicted RBP26.25■■□□□ 1.79
CTCF-203ENST00000566078 LGALS14Q8TCE9 139 aa26.25■■□□□ 1.79
CTCF-203ENST00000566078 HPGDSO60760 199 aa26.24■■□□□ 1.79
CTCF-203ENST00000566078 ZNF93P35789 620 aaPredicted RBP26.24■■□□□ 1.79
CTCF-203ENST00000566078 DYNC1I2Q13409 638 aaKnown RBP26.24■■□□□ 1.79
CTCF-203ENST00000566078 P2RY14Q15391 338 aa26.24■■□□□ 1.79
CTCF-203ENST00000566078 MOGQ16653 247 aa26.24■■□□□ 1.79
CTCF-203ENST00000566078 MOB3CQ70IA8 216 aa26.24■■□□□ 1.79
CTCF-203ENST00000566078 OR6M1Q8NGM8 313 aa26.24■■□□□ 1.79
CTCF-203ENST00000566078 LINC01560Q8TB33 94 aa26.24■■□□□ 1.79
CTCF-203ENST00000566078 CEP19Q96LK0 163 aa26.24■■□□□ 1.79
CTCF-203ENST00000566078 SORCS2Q96PQ0 1159 aa26.24■■□□□ 1.79
CTCF-203ENST00000566078 MIXL1Q9H2W2 232 aa26.24■■□□□ 1.79
CTCF-203ENST00000566078 ADGRG4Q8IZF6 3080 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 DPRXA6NFQ7 191 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 CST4P01036 141 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 PRF1P14222 555 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 HTR2CP28335 458 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 BSPH1Q075Z2 132 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 PRDX4Q13162 271 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 FAM166AQ6J272 317 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 RNF144BQ7Z419 303 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 PIAS4Q8N2W9 510 aaPredicted RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms