RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 RNF17Q9BXT8 1623 aaKnown RBP1.82□□□□□ -2.12
PALB2-203ENST00000565038 PDZK1P1A8MUH7 402 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 TNFRSF11BO00300 401 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 CHMP2AO43633 222 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 HMMRO75330 724 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 NTF3P20783 257 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 BMI1P35226 326 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 RAB7AP51149 207 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 RAB10P61026 200 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 SLC25A35Q3KQZ1 300 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 TPTE2P1Q5T6R2 138 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 PRAMEF20Q5VT98 475 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 CDH26Q8IXH8 852 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 STK40Q8N2I9 435 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
PALB2-203ENST00000565038 TPD52L3Q96J77 140 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 C18orf15Q96N68 181 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 GPR82Q96P67 336 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 ANP32EQ9BTT0 268 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 NUP58Q9BVL2 599 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 AGPAT4Q9NRZ5 378 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 MTCH1Q9NZJ7 389 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 PDP1Q9P0J1 537 aaPredicted RBP1.82□□□□□ -2.12
PALB2-203ENST00000565038 COMMD3-BMI1R4GMX3 469 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 MROH2AA6NES4 1674 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 ZC3H13Q5T200 1668 aaKnown RBP1.82□□□□□ -2.12
PALB2-203ENST00000565038 ROBO1Q9Y6N7 1651 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 CEP152O94986 1710 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 KIAA0232Q92628 1395 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 HFM1A2PYH4 1435 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 RRBP1Q9P2E9 1410 aaKnown RBP1.82□□□□□ -2.12
PALB2-203ENST00000565038 RALGAPBQ86X10 1494 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 IQGAP1P46940 1657 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.81□□□□□ -2.12
PALB2-203ENST00000565038 IGKV1-27A0A075B6S5 117 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 AP3B1O00203 1094 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 MFNGO00587 321 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 NDUFAB1O14561 156 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 SLC9A3R1O14745 358 aaPredicted RBP1.81□□□□□ -2.12
PALB2-203ENST00000565038 RPN2P04844 631 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 TPM2P07951 284 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 IDH2P48735 452 aaKnown RBP1.81□□□□□ -2.12
PALB2-203ENST00000565038 UBE2E1P51965 193 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 ZNF235Q14590 738 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 MAD2L1BPQ15013 274 aaPredicted RBP1.81□□□□□ -2.12
PALB2-203ENST00000565038 MED27Q6P2C8 311 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 SGPP2Q8IWX5 399 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 GTPBP8Q8N3Z3 284 aaPredicted RBP1.81□□□□□ -2.12
PALB2-203ENST00000565038 OR5K2Q8NHB8 316 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 NUDT9Q9BW91 350 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 LINC00574Q9H8X3 128 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 CSNK1G1Q9HCP0 422 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 SLC39A1Q9NY26 324 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 FARSAQ9Y285 508 aaKnown RBP1.81□□□□□ -2.12
PALB2-203ENST00000565038 PXDNQ92626 1479 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 ADGRB3O60242 1522 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 SLIT2O94813 1529 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 ASXL1Q8IXJ9 1541 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 DIP2AQ14689 1571 aa1.81□□□□□ -2.12
PALB2-203ENST00000565038 TRIOBPQ9H2D6 2365 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 EP400Q96L91 3159 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 CHD2O14647 1828 aaKnown RBP1.8□□□□□ -2.12
PALB2-203ENST00000565038 TRBV9A0A0B4J1U6 114 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 A0A1B0GUH1 482 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 CTAGE15A4D2H0 777 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 GOLGA8OA6NCC3 632 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 CCDC169A6NNP5 214 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 C9JVG2 144 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 GOLGA8NF8WBI6 632 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 IGLV6-57P01721 117 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 GLAP06280 429 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 CD28P10747 220 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 LGALS3P17931 250 aaKnown RBP1.8□□□□□ -2.12
PALB2-203ENST00000565038 CD70P32970 193 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 LRRC74AQ0VAA2 488 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 PRSS54Q6PEW0 395 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 DEGS2Q6QHC5 323 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 ADM2Q7Z4H4 148 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 CTAGE6Q86UF2 777 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 MDP1Q86V88 176 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 SLC38A4Q969I6 547 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 HAUS1Q96CS2 278 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 SEC22CQ9BRL7 303 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 FAM192AQ9GZU8 254 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 TMEM38AQ9H6F2 299 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 NMRK1Q9NWW6 199 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 SEC16AO15027 2179 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 SBNO1A3KN83 1393 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 CCDC144AA2RUR9 1427 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 MYOM2P54296 1465 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 RPRD2Q5VT52 1461 aaKnown RBP1.8□□□□□ -2.12
PALB2-203ENST00000565038 NEXMIFQ5QGS0 1516 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 NRXN3Q9Y4C0 1643 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 E9PCH4 1651 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 ZNF142P52746 1687 aaPredicted RBP1.8□□□□□ -2.12
PALB2-203ENST00000565038 SETD1AO15047 1707 aaKnown RBP1.8□□□□□ -2.12
PALB2-203ENST00000565038 PHLPP1O60346 1717 aa1.8□□□□□ -2.12
PALB2-203ENST00000565038 SHROOM3Q8TF72 1996 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 OR2AG2A6NM03 316 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 GABRPO00591 440 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms