RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 DEGS2Q6QHC5 323 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 PRSS45Q7RTY3 260 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 ENTHD1Q8IYW4 607 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 TEX29Q8N6K0 151 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 OR8S1Q8NH09 359 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 RHOXF1Q8NHV9 184 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 NANPQ8TBE9 248 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 ZNF418Q8TF45 676 aaPredicted RBP11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 ASB17Q8WXJ9 295 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 SGK3Q96BR1 496 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 NEIL1Q96FI4 390 aaPredicted RBP11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 SLC6A7Q99884 636 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 SSBP3Q9BWW4 388 aaPredicted RBP11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 SLC22A4Q9H015 551 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 PPP1R3EQ9H7J1 279 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 FN3KRPQ9HA64 309 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 C1orf123Q9NWV4 160 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 CLN6Q9NWW5 311 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 ZNF319Q9P2F9 582 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 MIOXQ9UGB7 285 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 OPN4Q9UHM6 478 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 COPS3Q9UNS2 423 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 NOP16Q9Y3C1 178 aaKnown RBP11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 PRR32B1ATL7 298 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 C3orf80F5H4A9 247 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 MPZL2O60487 215 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 GMDSO60547 372 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 GATA3P23771 443 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 GATA4P43694 442 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 FAM3AP98173 230 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 ZNF154Q13106 437 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 SCGB2A2Q13296 93 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 ZNF181Q2M3W8 571 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 ZNF404Q494X3 552 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 ARMCX4Q5H9R4 360 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 KCTD18Q6PI47 426 aaPredicted RBP11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 KRT77Q7Z794 578 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 SLC35F2Q8IXU6 374 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 BPIFB2Q8N4F0 458 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 ZNF555Q8NEP9 628 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 OR8B3Q8NGG8 313 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 OR51G2Q8NGK0 314 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 OR8B4Q96RC9 309 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 OR8B2Q96RD0 313 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 OR10A2Q9H208 303 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 OPA3Q9H6K4 179 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 NIPAL2Q9H841 368 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 SP140LQ9H930 580 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 RNPEPL1Q9HAU8 725 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 MRPL15Q9P015 296 aaKnown RBP11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 RNF7Q9UBF6 113 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 LRP12Q9Y561 859 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 INSIG2Q9Y5U4 225 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 AUP1Q9Y679 476 aa11.4□□□□□ -0.58
VPS9D1-204ENST00000565023 IGHV3OR15-7A0A075B7D8 119 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 A0A1B0GWJ7 208 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 PHYHO14832 338 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF254O75437 659 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF12P17014 697 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 DCTDP32321 178 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 GNALP38405 381 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 MTNR1AP48039 350 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 PITPNBP48739 271 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 PSMA6P60900 246 aaKnown RBP11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 CXCR4P61073 352 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 ADARB1P78563 741 aaKnown RBP11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 TTC23Q5W5X9 447 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF322Q6U7Q0 402 aaPredicted RBP11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 NLRC3Q7RTR2 1065 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF679Q8IYX0 411 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 CELF2-AS1Q8N7Q2 184 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 SPSB4Q96A44 273 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 TECTBQ96PL2 329 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 MRI1Q9BV20 369 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 PAPOLGQ9BWT3 736 aaKnown RBP11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 MROQ9BYG7 248 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 AASSQ9UDR5 926 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 LRCH1Q9Y2L9 728 aa11.39□□□□□ -0.59
VPS9D1-204ENST00000565023 hCG_38984A0A1B0GV85 526 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 A8MXK9 166 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF670-ZNF695F2Z2N8 137 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 J3QRE1 110 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 OR2T7P0C7T2 308 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 DDOSTP39656 456 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 GSK3AP49840 483 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 GMFBP60983 142 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 EGR3Q06889 387 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF691Q5VV52 312 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 DHRSXQ8N5I4 330 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 OR52H1Q8NGJ2 320 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 OR2T27Q8NH04 317 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 Q8TCH9 128 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 APH1BQ8WW43 257 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 NRG4Q8WWG1 115 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 ERGIC1Q969X5 290 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 Q96MT0 163 aa11.38□□□□□ -0.59
VPS9D1-204ENST00000565023 APOL4Q9BPW4 351 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms