RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 P2RY10O00398 339 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 SYT7O43581 403 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 DHRS3O75911 302 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 CST4P01036 141 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 RPSAP08865 295 aaKnown RBP13.53□□□□□ -0.24
RAB40C-208ENST00000564703 ZNF12P17014 697 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 CD200P41217 278 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 LOXL1Q08397 574 aaPredicted RBP13.53□□□□□ -0.24
RAB40C-208ENST00000564703 C6orf141Q5SZD1 244 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 TMEM244Q5VVB8 128 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 KLHL36Q8N4N3 616 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 PLPP7Q8NBV4 271 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 CCDC54Q8NEL0 328 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 OR11L1Q8NGX0 322 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 OR2G2Q8NGZ5 317 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 FBLIM1Q8WUP2 373 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 MICU1Q9BPX6 476 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 JAM3Q9BX67 310 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 Q9H521 79 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 ENPP5Q9UJA9 477 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 RAB26Q9ULW5 256 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 PIGLQ9Y2B2 252 aa13.53□□□□□ -0.24
RAB40C-208ENST00000564703 CAB39Q9Y376 341 aaPredicted RBP13.53□□□□□ -0.24
RAB40C-208ENST00000564703 IGHV3-64DA0A0J9YX35 117 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 ZNF850A8MQ14 1090 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 PTGES3LE9PB15 166 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 XPNPEP2O43895 674 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 RP2O75695 350 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 HEXAP06865 529 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 GRPP07492 148 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 UBCP0CG48 685 aaKnown RBP13.52□□□□□ -0.25
RAB40C-208ENST00000564703 PIPP12273 146 aaPredicted RBP13.52□□□□□ -0.25
RAB40C-208ENST00000564703 MYF6P23409 242 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 CCR9P51686 369 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 CHN2P52757 468 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 CDH15P55291 814 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 MVKQ03426 396 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 PRDX4Q13162 271 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 MAB21L1Q13394 359 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 ALKBH1Q13686 389 aaKnown RBP13.52□□□□□ -0.25
RAB40C-208ENST00000564703 WDR38Q5JTN6 314 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 ZBTB37Q5TC79 503 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 FDX2Q6P4F2 183 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 AHSA2Q719I0 299 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 BIVMQ86UB2 503 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 MOGAT3Q86VF5 341 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 C1orf87Q8N0U7 546 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 MAPK1IP1LQ8NDC0 245 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 HPS1Q92902 700 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 MYDGFQ969H8 173 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 PELI1Q96FA3 418 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 COX4I2Q96KJ9 171 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 SOX7Q9BT81 388 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 RTL8AQ9BWD3 113 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 ANKRD60Q9BZ19 345 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 ISG20L2Q9H9L3 353 aaKnown RBP13.52□□□□□ -0.25
RAB40C-208ENST00000564703 FN3KRPQ9HA64 309 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 GCM1Q9NP62 436 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 TMEM106BQ9NUM4 274 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 PSORS1C1Q9UIG5 152 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 TPRKBQ9Y3C4 175 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 CACNG2Q9Y698 323 aa13.52□□□□□ -0.25
RAB40C-208ENST00000564703 A6NLC8 198 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 SERPINA3P01011 423 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 LIMS3P0CW19 117 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 LIMS4P0CW20 117 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 ACKR3P25106 362 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 GATA4P43694 442 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 ETV1P50549 477 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 SPRNQ5BIV9 151 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 KCTD8Q6ZWB6 473 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 MOB3CQ70IA8 216 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 ZDHHC23Q8IYP9 409 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 ZNF676Q8N7Q3 588 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 RNF170Q96K19 258 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 CNBD2Q96M20 576 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 COMMD4Q9H0A8 199 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 RASSF4Q9H2L5 321 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 PLEKHA1Q9HB21 404 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 UFSP2Q9NUQ7 469 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 FRRS1LQ9P0K9 344 aa13.51□□□□□ -0.25
RAB40C-208ENST00000564703 A0A1B0GTI1 187 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 ISPDA4D126 451 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 NRASP01111 189 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 IGLV3-1P01715 115 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 CCDC159P0C7I6 412 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 AVPI1Q5T686 147 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 LAIR2Q6ISS4 152 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 RDH10Q8IZV5 341 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 PRSS35Q8N3Z0 413 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 ZNF420Q8TAQ5 688 aaPredicted RBP13.5□□□□□ -0.25
RAB40C-208ENST00000564703 DVL3Q92997 716 aaPredicted RBP13.5□□□□□ -0.25
RAB40C-208ENST00000564703 ZNF184Q99676 751 aaPredicted RBP13.5□□□□□ -0.25
RAB40C-208ENST00000564703 ZNF649Q9BS31 505 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 BABAM2Q9NXR7 383 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 PCDHB10Q9UN67 800 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 ERGIC3Q9Y282 383 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 NPTNQ9Y639 398 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 V9GYS6 101 aa13.5□□□□□ -0.25
RAB40C-208ENST00000564703 CSMD1Q96PZ7 3565 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms