RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 DOCK11Q5JSL3 2073 aa15.36■□□□□ 0.05
SYNGR3-204ENST00000564642 WNK2Q9Y3S1 2297 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 A8MXK9 166 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 TRAPPC2LH3BP13 241 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 TCF21O43680 179 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 IL5RAQ01344 420 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 SFRP4Q6FHJ7 346 aaPredicted RBP15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 ZNF322Q6U7Q0 402 aaPredicted RBP15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 DCDC5Q6ZRR9 648 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 ZNF826PQ6ZT77 177 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 COMMD2Q86X83 199 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 OR51G2Q8NGK0 314 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 OR8J1Q8NGP2 316 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 PIGCQ92535 297 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 MICU1Q9BPX6 476 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 MRI1Q9BV20 369 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 ABCB9Q9NP78 766 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 TRIM36Q9NQ86 728 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 MMP26Q9NRE1 261 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 CLN6Q9NWW5 311 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 FAM206AQ9NX38 181 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 MPC1Q9Y5U8 109 aa15.35■□□□□ 0.05
SYNGR3-204ENST00000564642 TRAV38-1A0A0B4J264 116 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 A0A0U1RQV5 110 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 C3orf80F5H4A9 247 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 LGALS8O00214 317 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 EI24O14681 340 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 ALPLP05186 524 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 ADRA2CP18825 462 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 ATP6V1E1P36543 226 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 MAP2K3P46734 347 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 POU4F2Q12837 409 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 PRDX4Q13162 271 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 C1QL2Q7Z5L3 287 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 OR1M1Q8NGA1 313 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 HIST1H2AAQ96QV6 131 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 APOL4Q9BPW4 351 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 RTL8AQ9BWD3 113 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 PBOV1Q9GZY1 135 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 PPP1R3EQ9H7J1 279 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 IMPAD1Q9NX62 359 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 USE1Q9NZ43 259 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 GTF2A1LQ9UNN4 478 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 INSIG2Q9Y5U4 225 aa15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 FBN1P35555 2871 aaKnown RBP15.34■□□□□ 0.05
SYNGR3-204ENST00000564642 ZNF850A8MQ14 1090 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 PRR32B1ATL7 298 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 CST4P01036 141 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 ZNF12P17014 697 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 ACKR3P25106 362 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 HTR1FP30939 366 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 CD80P33681 288 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 PITPNBP48739 271 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 ALDH3A2P51648 485 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 SRSF2Q01130 221 aaKnown RBP15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 EGR3Q06889 387 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 ZNF154Q13106 437 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 LYPD2Q6UXB3 125 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 GALNT4Q8N4A0 578 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 RFKQ969G6 155 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 ITFG2Q969R8 447 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 RNPEPL1Q9HAU8 725 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 CLN8Q9UBY8 286 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 OPN4Q9UHM6 478 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 AUP1Q9Y679 476 aa15.33■□□□□ 0.04
SYNGR3-204ENST00000564642 OOEPA6NGQ2 149 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 LOC110117498-PIK3R3F6TDL0 507 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 MAGEB4O15481 346 aaPredicted RBP15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 NDUFA2O43678 99 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 OR2T7P0C7T2 308 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 ATP6V1B1P15313 513 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 EPHA1P21709 976 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 HOXA4Q00056 320 aaPredicted RBP15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 TMED1Q13445 227 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 ZIK1Q3SY52 487 aaPredicted RBP15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 BTNL3Q6UXE8 466 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 KCTD8Q6ZWB6 473 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 THAP5Q7Z6K1 395 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 WDR86Q86TI4 376 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 C11orf53Q8IXP5 236 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 ZDHHC23Q8IYP9 409 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 GCSAMQ8N6F7 178 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 SEMA6DQ8NFY4 1073 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 OR2T27Q8NH04 317 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 OR51E1Q8TCB6 317 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 ZNF418Q8TF45 676 aaPredicted RBP15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 LRRC29Q8WV35 223 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 TRUB1Q8WWH5 349 aaKnown RBP15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 ITPKCQ96DU7 683 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 RNF170Q96K19 258 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 FAM71F1Q96KD3 344 aaPredicted RBP15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 TBX5Q99593 518 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 S100A14Q9HCY8 104 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 ERVK-18Q9QC07 812 aa15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 NUFIP1Q9UHK0 495 aaKnown RBP15.32■□□□□ 0.04
SYNGR3-204ENST00000564642 COL6A5A8TX70 2615 aa15.31■□□□□ 0.04
SYNGR3-204ENST00000564642 A0A0A6YYJ9 748 aa15.31■□□□□ 0.04
SYNGR3-204ENST00000564642 ZNF816-ZNF321PA0A0X1KG74 233 aa15.31■□□□□ 0.04
SYNGR3-204ENST00000564642 TMEM210A6NLX4 147 aa15.31■□□□□ 0.04
SYNGR3-204ENST00000564642 MTRF1O75570 445 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms