RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ENPP5Q9UJA9 477 aa14.15□□□□□ -0.14
RNF40-206ENST00000564260 BLOC1S6Q9UL45 172 aa14.15□□□□□ -0.14
RNF40-206ENST00000564260 TPRKBQ9Y3C4 175 aa14.15□□□□□ -0.14
RNF40-206ENST00000564260 CELSR1Q9NYQ6 3014 aa14.15□□□□□ -0.14
RNF40-206ENST00000564260 IGHV4-30-2A0A087WSY4 118 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 A0A1B0GVI7 797 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 LRRC30A6NM36 301 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 TMEM212A6NML5 194 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 J3QLW9 94 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 ZNF19P17023 458 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 CA6P23280 308 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 CDH15P55291 814 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 ST3GAL4Q11206 333 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 LAIR2Q6ISS4 152 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 COMMD2Q86X83 199 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 C1orf87Q8N0U7 546 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 STX19Q8N4C7 294 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 GTF3AQ92664 365 aaKnown RBP14.14□□□□□ -0.15
RNF40-206ENST00000564260 MYDGFQ969H8 173 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 GTF2A1LQ9UNN4 478 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 PPP1R3CQ9UQK1 317 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 V9GYS6 101 aa14.14□□□□□ -0.15
RNF40-206ENST00000564260 TMEM210A6NLX4 147 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 SLC1A7O00341 560 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 LILRA1O75019 489 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 LY6HO94772 140 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 USF1P22415 310 aaPredicted RBP14.13□□□□□ -0.15
RNF40-206ENST00000564260 ANOS1P23352 680 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 ACKR3P25106 362 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 GPR6P46095 362 aaPredicted RBP14.13□□□□□ -0.15
RNF40-206ENST00000564260 TAS2R43P59537 309 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 ALKBH1Q13686 389 aaKnown RBP14.13□□□□□ -0.15
RNF40-206ENST00000564260 WDR38Q5JTN6 314 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 BPIFB6Q8NFQ5 453 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 OR10AD1Q8NGE0 317 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 OR8S1Q8NH09 359 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 RAB1CQ92928 201 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 HIST1H2AAQ96QV6 131 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 MICU1Q9BPX6 476 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 PAPOLGQ9BWT3 736 aaKnown RBP14.13□□□□□ -0.15
RNF40-206ENST00000564260 GCM1Q9NP62 436 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 ZNF275Q9NSD4 429 aaPredicted RBP14.13□□□□□ -0.15
RNF40-206ENST00000564260 PCDHGB5Q9Y5G0 923 aa14.13□□□□□ -0.15
RNF40-206ENST00000564260 A0A096LNT2 108 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 A0A1B0GTI1 187 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 MAGEB4O15481 346 aaPredicted RBP14.12□□□□□ -0.15
RNF40-206ENST00000564260 SYT7O43581 403 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 DENRO43583 198 aaKnown RBP14.12□□□□□ -0.15
RNF40-206ENST00000564260 HEXAP06865 529 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 COL8A2P25067 703 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 CHN2P52757 468 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 MAB21L1Q13394 359 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 FAM76BQ5HYJ3 339 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 RBM48Q5RL73 367 aaKnown RBP14.12□□□□□ -0.15
RNF40-206ENST00000564260 TMEM42Q69YG0 159 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 RPL22L1Q6P5R6 122 aaKnown RBP14.12□□□□□ -0.15
RNF40-206ENST00000564260 BIVMQ86UB2 503 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 ZDHHC23Q8IYP9 409 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 PRSS35Q8N3Z0 413 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 OR11L1Q8NGX0 322 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 OR14K1Q8NGZ2 314 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 ITLN1Q8WWA0 313 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 PP6455Q8WZ26 134 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 YIPF5Q969M3 257 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 RNF166Q96A37 237 aaPredicted RBP14.12□□□□□ -0.15
RNF40-206ENST00000564260 ITPKCQ96DU7 683 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 RTL8AQ9BWD3 113 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 CDCA4Q9BXL8 241 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 BPESC1Q9GZL8 116 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 COMMD4Q9H0A8 199 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 FN3KRPQ9HA64 309 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 TRIM36Q9NQ86 728 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 TMEM106BQ9NUM4 274 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 BABAM2Q9NXR7 383 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 FRRS1LQ9P0K9 344 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 ERGIC3Q9Y282 383 aa14.12□□□□□ -0.15
RNF40-206ENST00000564260 TRIM64A6NGJ6 449 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 TRIM64BA6NI03 449 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 OR5B21A6NL26 309 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 F5H5P2 479 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 H7C1Q1 480 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 XPNPEP2O43895 674 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 MRPS14O60783 128 aaKnown RBP14.11□□□□□ -0.15
RNF40-206ENST00000564260 CDK1P06493 297 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 CFHR2P36980 270 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 ETV1P50549 477 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 SLC35A2P78381 396 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 BDH1Q02338 343 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 CARTPTQ16568 116 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 CEACAM21Q3KPI0 293 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 CLVS2Q5SYC1 327 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 AHSA2Q719I0 299 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 OR5A2Q8NGI9 324 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 RPS4Y2Q8TD47 263 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 CCL17Q92583 94 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 FAM71F1Q96KD3 344 aaPredicted RBP14.11□□□□□ -0.15
RNF40-206ENST00000564260 TLNRD1Q9H1K6 362 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 DUSP21Q9H596 190 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 PLEKHA1Q9HB21 404 aa14.11□□□□□ -0.15
RNF40-206ENST00000564260 HHLA2Q9UM44 414 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms