RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SERPINE3A8MV23 424 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 IQCF6A8MYZ5 107 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 RFXANKO14593 260 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 ACOT8O14734 319 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 PGA4P0DJD7 388 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 PGA3P0DJD8 388 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 SELLP14151 372 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 AMY2BP19961 511 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 RUNX1Q01196 453 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 LRRC74AQ0VAA2 488 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 RGNQ15493 299 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 ALG10BQ5I7T1 473 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 FAM91A1Q658Y4 838 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 DHRS4L2Q6PKH6 230 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 TSPYL5Q86VY4 417 aaPredicted RBP8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 NUDCD3Q8IVD9 361 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 STPG2Q8N412 459 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 TMEM217Q8N7C4 229 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 OR6X1Q8NH79 312 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 TMEM255BQ8WV15 326 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 DNAJA4Q8WW22 397 aaPredicted RBP8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 OR2H1Q9GZK4 316 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 SIAEQ9HAT2 523 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 PLEKHA3Q9HB20 300 aa8.05□□□□□ -1.12
HDGFL3-204ENST00000563790 A0A0G2JLM5 398 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 MSGN1A6NI15 193 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 I3L521 148 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 BIRC5O15392 142 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 IFNA4P05014 189 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 ARG1P05089 322 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 IGHV1-8P0DP01 117 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 SLC1A6P48664 564 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 ZNF133P52736 654 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 SLC25A1P53007 311 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 BIDP55957 195 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 TRAP1Q12931 704 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 PNLIPRP3Q17RR3 467 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 MICBQ29980 383 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 C1orf134Q5TEV5 83 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 ULK3Q6PHR2 472 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 Q6ZSN1 163 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 MAVSQ7Z434 540 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 RANBP3LQ86VV4 465 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 PGAM4Q8N0Y7 254 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 BHLHE23Q8NDY6 225 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 OR9I1Q8NGQ6 314 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 GTF2H4Q92759 462 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 NMD3Q96D46 503 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 TMEM43Q9BTV4 400 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 MRPL13Q9BYD1 178 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 WDR55Q9H6Y2 383 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 SLC25A37Q9NYZ2 338 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 HILPDAQ9Y5L2 63 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 GMEB1Q9Y692 573 aa8.04□□□□□ -1.12
HDGFL3-204ENST00000563790 TRBV5-3A0A0A0MS03 114 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 IL6P05231 212 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 NQO1P15559 274 aaKnown RBP8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 CD24P25063 80 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 GDNFP39905 211 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 CDH12P55289 794 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 XGP55808 180 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 CAV3P56539 151 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 ISL1P61371 349 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 ERVK-25P63136 954 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 OR1Q1Q15612 314 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 TNFAIP8L3Q5GJ75 292 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 ATPAF1Q5TC12 328 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 ZNF626Q68DY1 528 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 SLC35D2Q76EJ3 337 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 OR9Q1Q8NGQ5 310 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 OR5J2Q8NH18 312 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 BBS10Q8TAM1 723 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 SLC25A44Q96H78 314 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 C17orf77Q96MU5 243 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 ZNF426Q9BUY5 554 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 SDR39U1Q9NRG7 319 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 THUMPD1Q9NXG2 353 aaKnown RBP8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 SLC25A10Q9UBX3 287 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 STUB1Q9UNE7 303 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 UGT2A1Q9Y4X1 527 aa8.03□□□□□ -1.12
HDGFL3-204ENST00000563790 IGKV1D-43A0A0B4J1Z2 117 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 C11orf98E9PRG8 122 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 SERPINI2O75830 405 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 MT-ATP6P00846 226 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 BGNP21810 368 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 POU1F1P28069 291 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 ZNF84P51523 738 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 MRPS34P82930 218 aaKnown RBP8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 GPR50Q13585 617 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 MELKQ14680 651 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 ZNF74Q16587 644 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 MSANTD1Q6ZTZ1 278 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 SPATA12Q7Z6I5 190 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 RGP1Q92546 391 aaPredicted RBP8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 ZNF566Q969W8 418 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 TMEM109Q9BVC6 243 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 ARMC7Q9H6L4 198 aa8.02□□□□□ -1.13
HDGFL3-204ENST00000563790 SLAMF8Q9P0V8 285 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms