RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 GALK2Q01415 458 aa4□□□□□ -1.77
CDR2-203ENST00000563573 SLC3A1Q07837 685 aa4□□□□□ -1.77
CDR2-203ENST00000563573 ALKBH1Q13686 389 aaKnown RBP4□□□□□ -1.77
CDR2-203ENST00000563573 ENDOGQ14249 297 aaKnown RBP4□□□□□ -1.77
CDR2-203ENST00000563573 RAB35Q15286 201 aa4□□□□□ -1.77
CDR2-203ENST00000563573 GABRA6Q16445 453 aa4□□□□□ -1.77
CDR2-203ENST00000563573 TSTQ16762 297 aaKnown RBP4□□□□□ -1.77
CDR2-203ENST00000563573 GSG1Q2KHT4 349 aa4□□□□□ -1.77
CDR2-203ENST00000563573 ZNF829Q3KNS6 432 aaPredicted RBP4□□□□□ -1.77
CDR2-203ENST00000563573 ZNF260Q3ZCT1 412 aa4□□□□□ -1.77
CDR2-203ENST00000563573 PLA1AQ53H76 456 aa4□□□□□ -1.77
CDR2-203ENST00000563573 CCDC92Q53HC0 331 aaPredicted RBP4□□□□□ -1.77
CDR2-203ENST00000563573 ELFN2Q5R3F8 820 aa4□□□□□ -1.77
CDR2-203ENST00000563573 HIST2H3PS2Q5TEC6 136 aa4□□□□□ -1.77
CDR2-203ENST00000563573 TMEM244Q5VVB8 128 aa4□□□□□ -1.77
CDR2-203ENST00000563573 GPR107Q5VW38 600 aa4□□□□□ -1.77
CDR2-203ENST00000563573 LIPNQ5VXI9 398 aa4□□□□□ -1.77
CDR2-203ENST00000563573 LIPKQ5VXJ0 399 aa4□□□□□ -1.77
CDR2-203ENST00000563573 PAMR1Q6UXH9 720 aa4□□□□□ -1.77
CDR2-203ENST00000563573 UNQ6126/PRO20091Q6UXV3 157 aa4□□□□□ -1.77
CDR2-203ENST00000563573 TFAP2EQ6VUC0 442 aa4□□□□□ -1.77
CDR2-203ENST00000563573 ZNF704Q6ZNC4 412 aaPredicted RBP4□□□□□ -1.77
CDR2-203ENST00000563573 GDPGP1Q6ZNW5 385 aa4□□□□□ -1.77
CDR2-203ENST00000563573 HIST2H3AQ71DI3 136 aa4□□□□□ -1.77
CDR2-203ENST00000563573 LINGO2Q7L985 606 aa4□□□□□ -1.77
CDR2-203ENST00000563573 BHLHA15Q7RTS1 189 aaPredicted RBP4□□□□□ -1.77
CDR2-203ENST00000563573 SSX8Q7RTT4 187 aa4□□□□□ -1.77
CDR2-203ENST00000563573 SSX6Q7RTT6 188 aa4□□□□□ -1.77
CDR2-203ENST00000563573 SATL1Q86VE3 508 aa4□□□□□ -1.77
CDR2-203ENST00000563573 P2RY8Q86VZ1 359 aa4□□□□□ -1.77
CDR2-203ENST00000563573 ANKRD13BQ86YJ7 626 aa4□□□□□ -1.77
CDR2-203ENST00000563573 C17orf78Q8N4C9 275 aa4□□□□□ -1.77
CDR2-203ENST00000563573 ZNF433Q8N7K0 673 aaPredicted RBP4□□□□□ -1.77
CDR2-203ENST00000563573 ZNF676Q8N7Q3 588 aa4□□□□□ -1.77
CDR2-203ENST00000563573 STEAP2Q8NFT2 490 aa4□□□□□ -1.77
CDR2-203ENST00000563573 OR1J2Q8NGS2 313 aa4□□□□□ -1.77
CDR2-203ENST00000563573 OR5AK2Q8NH90 309 aa4□□□□□ -1.77
CDR2-203ENST00000563573 OR1F12Q8NHA8 337 aa4□□□□□ -1.77
CDR2-203ENST00000563573 SVIPQ8NHG7 77 aa4□□□□□ -1.77
CDR2-203ENST00000563573 ZNF420Q8TAQ5 688 aaPredicted RBP4□□□□□ -1.77
CDR2-203ENST00000563573 ST7LQ8TDW4 575 aa4□□□□□ -1.77
CDR2-203ENST00000563573 RNF133Q8WVZ7 376 aa4□□□□□ -1.77
CDR2-203ENST00000563573 HSD17B8Q92506 261 aa4□□□□□ -1.77
CDR2-203ENST00000563573 THRSPQ92748 146 aa4□□□□□ -1.77
CDR2-203ENST00000563573 BCL2L2Q92843 193 aaPredicted RBP4□□□□□ -1.77
CDR2-203ENST00000563573 SPSB4Q96A44 273 aa4□□□□□ -1.77
CDR2-203ENST00000563573 NABP1Q96AH0 204 aa4□□□□□ -1.77
CDR2-203ENST00000563573 TMIGD2Q96BF3 282 aa4□□□□□ -1.77
CDR2-203ENST00000563573 MUCL1Q96DR8 90 aa4□□□□□ -1.77
CDR2-203ENST00000563573 FBXO17Q96EF6 278 aa4□□□□□ -1.77
CDR2-203ENST00000563573 PELI1Q96FA3 418 aa4□□□□□ -1.77
CDR2-203ENST00000563573 COQ7Q99807 217 aa4□□□□□ -1.77
CDR2-203ENST00000563573 ATF6BQ99941 703 aa4□□□□□ -1.77
CDR2-203ENST00000563573 BCL7BQ9BQE9 202 aa4□□□□□ -1.77
CDR2-203ENST00000563573 ZNF649Q9BS31 505 aa4□□□□□ -1.77
CDR2-203ENST00000563573 TTTY10Q9BZA0 68 aa4□□□□□ -1.77
CDR2-203ENST00000563573 HDHD2Q9H0R4 259 aa4□□□□□ -1.77
CDR2-203ENST00000563573 OPN3Q9H1Y3 402 aaPredicted RBP4□□□□□ -1.77
CDR2-203ENST00000563573 ELOVL3Q9HB03 270 aa4□□□□□ -1.77
CDR2-203ENST00000563573 OBP2BQ9NPH6 170 aa4□□□□□ -1.77
CDR2-203ENST00000563573 SLCO1C1Q9NYB5 712 aa4□□□□□ -1.77
CDR2-203ENST00000563573 EIF3KQ9UBQ5 218 aaKnown RBP4□□□□□ -1.77
CDR2-203ENST00000563573 MRM2Q9UI43 246 aaKnown RBP4□□□□□ -1.77
CDR2-203ENST00000563573 ERRFI1Q9UJM3 462 aaPredicted RBP4□□□□□ -1.77
CDR2-203ENST00000563573 GTF2A1LQ9UNN4 478 aa4□□□□□ -1.77
CDR2-203ENST00000563573 LSM2Q9Y333 95 aaKnown RBP4□□□□□ -1.77
CDR2-203ENST00000563573 LRP12Q9Y561 859 aa4□□□□□ -1.77
CDR2-203ENST00000563573 LHFPL6Q9Y693 200 aa4□□□□□ -1.77
CDR2-203ENST00000563573 INTS1Q8N201 2190 aaKnown RBP4□□□□□ -1.77
CDR2-203ENST00000563573 SETXQ7Z333 2677 aaKnown RBP3.99□□□□□ -1.77
CDR2-203ENST00000563573 NCOA6Q14686 2063 aaPredicted RBP3.99□□□□□ -1.77
CDR2-203ENST00000563573 SHANK1Q9Y566 2161 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 CFAP46Q8IYW2 2715 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 ARPC4-TTLL3A0A0A6YYG9 625 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 PNMA8CA0A1B0GUJ8 204 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 EEF1E1-BLOC1S5C9J1V9 151 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 F5H5K5 113 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 LOC110117498-PIK3R3F6TDL0 507 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 C16orf97H3BN30 126 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 ZNF701M0R085 212 aaPredicted RBP3.99□□□□□ -1.77
CDR2-203ENST00000563573 RER1O15258 196 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 MAGEB4O15481 346 aaPredicted RBP3.99□□□□□ -1.77
CDR2-203ENST00000563573 LRRTM2O43300 516 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 EEF1E1O43324 174 aaKnown RBP3.99□□□□□ -1.77
CDR2-203ENST00000563573 AIREO43918 545 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 DOK2O60496 412 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 RAD51DO75771 328 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 LYZL6O75951 148 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 LCATP04180 440 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 ANXA2P07355 339 aaKnown RBP3.99□□□□□ -1.77
CDR2-203ENST00000563573 ITGA5P08648 1049 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 ADRA2AP08913 450 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 PATE4P0C8F1 98 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 ZNF12P17014 697 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 ZNF32P17041 273 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 GALP22466 123 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 CCNOP22674 350 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 STOMP27105 288 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 CHRNB4P30926 498 aa3.99□□□□□ -1.77
CDR2-203ENST00000563573 GABRA5P31644 462 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms