RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 RTP3Q9BQQ7 232 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 SRD5A3Q9H8P0 318 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 HEXA-AS1Q9H8Q6 139 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 KIAA1551Q9HCM1 1747 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 KIR2DS1A0A191URI9 304 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 GREM1O60565 184 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 ZNF737O75373 536 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 KIR2DS4P43632 304 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 KIR2DS1Q14954 304 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 MPV17LQ2QL34 196 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 PRRT3Q5FWE3 981 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 DGAT2L6Q6ZPD8 337 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 NUFIP2Q7Z417 695 aaKnown RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 C19orf47Q8N9M1 422 aaKnown RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 OR5A1Q8NGJ0 315 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 SCAMP5Q8TAC9 235 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 RAB40CQ96S21 281 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 GLOD5A6NK44 160 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 VEGFDO43915 354 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 RAB32Q13637 225 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 ZNF765Q7L2R6 523 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 ARFGEF1Q9Y6D6 1849 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 F5H5K5 113 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 CDS2O95674 445 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 CDKN1BP46527 198 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 HINT1P49773 126 aaPredicted RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 CATR1Q13166 79 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 RTL8BQ17RB0 113 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 MORN1Q5T089 497 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 FAM71E1Q6IPT2 247 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 OR4S1Q8NGB4 309 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 TMEM106CQ9BVX2 250 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 MFRPQ9BY79 579 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 GOLGA2P5Q9HBQ8 144 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 FBXO34Q9NWN3 711 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 A0A087WUU8 490 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 CBR3O75828 277 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 CD74P04233 296 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 POU3F2P20265 443 aaPredicted RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 TNFSF10P50591 281 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 PNLIPRP2P54317 469 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 SLC25A34Q6PIV7 304 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 LSRQ86X29 649 aaPredicted RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 LINC00116Q8NCU8 138 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 MISP3Q96FF7 219 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 TMEM150CB9EJG8 249 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 LEFTY2O00292 366 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 CDKN2AP42771 156 aaKnown RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 TMEM255BQ8WV15 326 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 ZNF48Q96MX3 618 aaPredicted RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 CHTOPQ9Y3Y2 248 aaKnown RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 H3BMH7 237 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 PTX4Q96A99 478 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 ZPBPQ9BS86 351 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 WDR13Q9H1Z4 485 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 MRPL17Q9NRX2 175 aaKnown RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 CHEK1O14757 476 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 TMIGD3P0DMS9 266 aaPredicted RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 SRSF5Q13243 272 aaKnown RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 TTC32Q5I0X7 151 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 FAM78BQ5VT40 261 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 SLC5A6Q9Y289 635 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 HMGN4O00479 90 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 LANCL1O43813 399 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 PITX3O75364 302 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 LEFTY1O75610 366 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 CLDN1O95832 211 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 DANCRP0C864 163 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 SCGB1A1P11684 91 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 CD79AP11912 226 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 FGF5P12034 268 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 TAS2R45P59539 299 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 OR9A4Q8NGU2 314 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 MRPS2Q9Y399 296 aaKnown RBP5.65□□□□□ -1.5
CLK3-212ENST00000563418 TMED7Q9Y3B3 224 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 ISLRO14498 428 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 TSPAN6O43657 245 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 PWWP2BQ6NUJ5 590 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 RPS4Y2Q8TD47 263 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 RIMS4Q9H426 269 aaPredicted RBP5.65□□□□□ -1.5
CLK3-212ENST00000563418 CXorf36Q9H7Y0 433 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 TMEM242Q9NWH2 141 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 C11orf98E9PRG8 122 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 H7C1C5 153 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 ELLP55199 621 aaPredicted RBP5.65□□□□□ -1.5
CLK3-212ENST00000563418 SNU13P55769 128 aaKnown RBP5.65□□□□□ -1.5
CLK3-212ENST00000563418 UBE2V1Q13404 147 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 C1orf185Q5T7R7 199 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 DMKNQ6E0U4 476 aaPredicted RBP5.65□□□□□ -1.5
CLK3-212ENST00000563418 SUSD3Q96L08 255 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 KIR3DX1Q9H7L2 352 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 CALHM2Q9HA72 323 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 FBXO4Q9UKT5 387 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 RCL1Q9Y2P8 373 aaKnown RBP5.65□□□□□ -1.5
CLK3-212ENST00000563418 HIST1H2BKO60814 126 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 ZNF253O75346 499 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 HIST1H2BJP06899 126 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 C1SP09871 688 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 HIST1H2BOP23527 126 aa5.65□□□□□ -1.5
CLK3-212ENST00000563418 BLVRBP30043 206 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms