RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ATP6V1E1P36543 226 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 CAPGP40121 348 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 PSMB10P40306 273 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 KIR3DL2P43630 455 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 GZMKP49863 264 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 CDH15P55291 814 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 OR12D2P58182 307 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 IL5RAQ01344 420 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 SLC3A1Q07837 685 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 ZNF181Q2M3W8 571 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 TUSC1Q2TAM9 212 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 FAM201AQ5SY85 155 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 TTC23Q5W5X9 447 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 LRRC28Q86X40 367 aaPredicted RBP7.18□□□□□ -1.26
UBR1-204ENST00000563239 KLBQ86Z14 1044 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 DHRSXQ8N5I4 330 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 ACBD7Q8N6N7 88 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 YIPF7Q8N8F6 280 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 CSNK2A3Q8NEV1 391 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 OR52I1Q8NGK6 324 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 CNIH3Q8TBE1 160 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 FBLIM1Q8WUP2 373 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 TFAP2CQ92754 450 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 RAB1CQ92928 201 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 ITPKCQ96DU7 683 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 Q96MT0 163 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 ADI1Q9BV57 179 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 FGF20Q9NP95 211 aaPredicted RBP7.18□□□□□ -1.26
UBR1-204ENST00000563239 YAE1D1Q9NRH1 226 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 ACOXLQ9NUZ1 547 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 ZNF391Q9UJN7 358 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 SNX5Q9Y5X3 404 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 NBEAL1Q6ZS30 2694 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 DAPL1A0PJW8 107 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ANKRD30BLA7E2S9 258 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ZNF850A8MQ14 1090 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 H0YAE9 185 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 IFNL4K9M1U5 179 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 P2RY10O00398 339 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ZNF205O95201 554 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 LHBP01229 141 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 LIMS3P0CW19 117 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 LIMS4P0CW20 117 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 CCL1P22362 96 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 THBS2P35442 1172 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 NANOS3P60323 173 aaKnown RBP7.17□□□□□ -1.26
UBR1-204ENST00000563239 BTG1P62324 171 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ACTC1P68032 377 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ACTA1P68133 377 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 GUCA2AQ02747 115 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 RAB40BQ12829 278 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 PRDX4Q13162 271 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 IL18R1Q13478 541 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 WDR38Q5JTN6 314 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 BCL2L15Q5TBC7 163 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 TMEM42Q69YG0 159 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 FDX2Q6P4F2 183 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ZNF826PQ6ZT77 177 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 LHFPL3Q86UP9 236 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 LINC01356Q8N9X3 169 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 SPERTQ8NA61 448 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 OR14K1Q8NGZ2 314 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 HPSE2Q8WWQ2 592 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 OR5P3Q8WZ94 311 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ERGIC1Q969X5 290 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 PELI1Q96FA3 418 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 FAM71F1Q96KD3 344 aaPredicted RBP7.17□□□□□ -1.26
UBR1-204ENST00000563239 PAPOLGQ9BWT3 736 aaKnown RBP7.17□□□□□ -1.26
UBR1-204ENST00000563239 JAM3Q9BX67 310 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 TLNRD1Q9H1K6 362 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ZNF665Q9H7R5 613 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 MOB1AQ9H8S9 216 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ISG20L2Q9H9L3 353 aaKnown RBP7.17□□□□□ -1.26
UBR1-204ENST00000563239 TMEM165Q9HC07 324 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 UFSP2Q9NUQ7 469 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 ERVK13-1Q9NX77 482 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 GNG8Q9UK08 70 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 NOP16Q9Y3C1 178 aaKnown RBP7.17□□□□□ -1.26
UBR1-204ENST00000563239 RPL36Q9Y3U8 105 aaKnown RBP7.17□□□□□ -1.26
UBR1-204ENST00000563239 PCDHGB1Q9Y5G3 927 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 MPC1Q9Y5U8 109 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 V9GYS6 101 aa7.17□□□□□ -1.26
UBR1-204ENST00000563239 MALRD1Q5VYJ5 2156 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.16□□□□□ -1.26
UBR1-204ENST00000563239 ZNF816-ZNF321PA0A0X1KG74 233 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 SNTNA6NMZ2 147 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 A8MV72 311 aaPredicted RBP7.16□□□□□ -1.26
UBR1-204ENST00000563239 E9PI62 339 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 F5H0A9 414 aaPredicted RBP7.16□□□□□ -1.26
UBR1-204ENST00000563239 TNFRSF13BO14836 293 aaPredicted RBP7.16□□□□□ -1.26
UBR1-204ENST00000563239 LMX1BO60663 402 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 DHRS3O75911 302 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 FSTL3O95633 263 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 FADS2O95864 444 aaKnown RBP7.16□□□□□ -1.26
UBR1-204ENST00000563239 TGFAP01135 160 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 GRPP07492 148 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 ATP6V1B1P15313 513 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 FAHP16930 419 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 EGR1P18146 543 aa7.16□□□□□ -1.26
UBR1-204ENST00000563239 MAP2K3P46734 347 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms