RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CACNA1EQ15878 2313 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 A0A0A6YYJ9 748 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ANKRD61A6NGH8 418 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 H7C417 338 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 IFNA2P01563 188 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 SERPINA2P20848 420 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 RFC3P40938 356 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 GZMKP49863 264 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ZNF718Q3SXZ3 478 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 GLYATL3Q5SZD4 288 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 NPEPL1Q8NDH3 523 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 PLK3Q9H4B4 646 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ZNF705FA8MVS1 300 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 GLSO94925 669 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 LPLP06858 475 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ASAH2BP0C7U1 165 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ZNF705DP0CH99 300 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 ZNF705BP0CI00 300 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 SSBP1Q04837 148 aaKnown RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 ANKRD39Q53RE8 183 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 TEX261Q6UWH6 196 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 COX15Q7KZN9 410 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 TRILQ7L0X0 811 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ZNF573Q86YE8 665 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 OR6F1Q8NGZ6 308 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 OR51E1Q8TCB6 317 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 APH1BQ8WW43 257 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ALKBH3Q96Q83 286 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 MFRPQ9BY79 579 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 SLC17A5Q9NRA2 495 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 U3KQ87 197 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 HELZP42694 1942 aaKnown RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 ZNF816-ZNF321PA0A0X1KG74 233 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 RNF212BA8MTL3 300 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 RECKO95980 971 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 CPN1P15169 458 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 CD96P40200 585 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 IDH3GP51553 393 aaPredicted RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 P2RY4P51582 365 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 MTFR2Q6P444 385 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 FAM185AQ8N0U4 392 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 PELI1Q96FA3 418 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 ASF1BQ9NVP2 202 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 LRP12Q9Y561 859 aa6.73□□□□□ -1.33
TCF4-216ENST00000562680 PCDHGA9Q9Y5G4 932 aaKnown RBP6.73□□□□□ -1.33
TCF4-216ENST00000562680 THADAQ6YHU6 1953 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 IGHV3-15A0A0B4J1V0 119 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 LRRC30A6NM36 301 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 IFITM5A6NNB3 132 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SHISA8B8ZZ34 492 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 B4GALT1P15291 398 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 CDK2P24941 298 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 FXYD6P3P58550 94 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 ARF1P84077 181 aaKnown RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 FABP5Q01469 135 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 CFHR1Q03591 330 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 XAF1Q6GPH4 301 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SPINK14Q6IE38 97 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 NRARPQ7Z6K4 114 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 GLRX5Q86SX6 157 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 ARHGEF39Q8N4T4 335 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 OR56B4Q8NH76 319 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 C10orf35Q96D05 121 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SLC6A7Q99884 636 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 RBFOX1Q9NWB1 397 aaKnown RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 ASCC3Q8N3C0 2202 aaKnown RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 NOTCH4Q99466 2003 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 CNOT1A5YKK6 2376 aaKnown RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 TMEM82A0PJX8 343 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 TCF21O43680 179 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 OR7C1O76099 320 aaPredicted RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 SCGB1D2O95969 90 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 CD1AP06126 327 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 DBHP09172 617 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 CTLA4P16410 223 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 FGF7P21781 194 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 GGTLC2Q14390 218 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 LPCAT3Q6P1A2 487 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 GPR155Q7Z3F1 870 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SYT9Q86SS6 491 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 LAX1Q8IWV1 398 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 ZNF687Q8N1G0 1237 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 APCDD1LQ8NCL9 501 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 HGDQ93099 445 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 GAL3ST2Q9H3Q3 398 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 CACNA1IQ9P0X4 2223 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 GABARAPH6UMI1 98 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 TK1P04183 234 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 CST2P09228 141 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 MRPS34P82930 218 aaKnown RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 KRTCAP3Q53RY4 240 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 MESTQ5EB52 335 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 PEAR1Q5VY43 1037 aaPredicted RBP6.72□□□□□ -1.33
TCF4-216ENST00000562680 GLIPR1L1Q6UWM5 242 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 PLXDC2Q6UX71 529 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 SGPP2Q8IWX5 399 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 OR51D1Q8NGF3 324 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 CASTOR1Q8WTX7 329 aa6.72□□□□□ -1.33
TCF4-216ENST00000562680 DOK1Q99704 481 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms