RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.54□□□□□ -0.24
COMMD4-206ENST00000562610 RHBDD3Q9Y3P4 386 aa13.54□□□□□ -0.24
COMMD4-206ENST00000562610 PPIAL4AQ9Y536 164 aa13.54□□□□□ -0.24
COMMD4-206ENST00000562610 A0A0U1RQV5 110 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 ACOD1A6NK06 481 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 ZNF850A8MQ14 1090 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 FOXH1O75593 365 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 PTBP3O95758 552 aaKnown RBP13.53□□□□□ -0.24
COMMD4-206ENST00000562610 OR2T7P0C7T2 308 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 CD80P33681 288 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 HOXA4Q00056 320 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-206ENST00000562610 TMED1Q13445 227 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 ZNF404Q494X3 552 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 ESCO2Q56NI9 601 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 DCAF12L2Q5VW00 463 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 ZNF826PQ6ZT77 177 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 OR2T27Q8NH04 317 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 OR51E1Q8TCB6 317 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 TRUB1Q8WWH5 349 aaKnown RBP13.53□□□□□ -0.24
COMMD4-206ENST00000562610 PIGCQ92535 297 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 FAM71F1Q96KD3 344 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-206ENST00000562610 MICU1Q9BPX6 476 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 G6PC2Q9NQR9 355 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 GPR84Q9NQS5 396 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 NUFIP1Q9UHK0 495 aaKnown RBP13.53□□□□□ -0.24
COMMD4-206ENST00000562610 MRM2Q9UI43 246 aaKnown RBP13.53□□□□□ -0.24
COMMD4-206ENST00000562610 R4GMQ9 66 aa13.53□□□□□ -0.24
COMMD4-206ENST00000562610 A0A1W2PQL4 384 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-206ENST00000562610 F5H0A9 414 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-206ENST00000562610 ENTPD6O75354 484 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 RPP14O95059 124 aaKnown RBP13.52□□□□□ -0.25
COMMD4-206ENST00000562610 MAP2K3P46734 347 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 MTNR1AP48039 350 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 SNRPGP62308 76 aaKnown RBP13.52□□□□□ -0.25
COMMD4-206ENST00000562610 IL5RAQ01344 420 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 MEDAGQ5VYS4 303 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 KCTD8Q6ZWB6 473 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 FAM220AQ7Z4H9 259 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 WDR86Q86TI4 376 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 PLPP7Q8NBV4 271 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 DEFB108BQ8NET1 73 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 ITPKCQ96DU7 683 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 TMEM246Q9BRR3 403 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 RTL8AQ9BWD3 113 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 TMEM165Q9HC07 324 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 ABCB9Q9NP78 766 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 MPC1Q9Y5U8 109 aa13.52□□□□□ -0.25
COMMD4-206ENST00000562610 ZNF816-ZNF321PA0A0X1KG74 233 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 ANKRD65E5RJM6 399 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 C3orf80F5H4A9 247 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 PHF1O43189 567 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-206ENST00000562610 SRSF10O75494 262 aaKnown RBP13.51□□□□□ -0.25
COMMD4-206ENST00000562610 TTRP02766 147 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 ZFP36P26651 326 aaKnown RBP13.51□□□□□ -0.25
COMMD4-206ENST00000562610 CSNK2BP67870 215 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 ZNF154Q13106 437 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 RCN1Q15293 331 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 LRRC36Q1X8D7 754 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 SFRP4Q6FHJ7 346 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-206ENST00000562610 NLRC3Q7RTR2 1065 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 THAP5Q7Z6K1 395 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 ZDHHC23Q8IYP9 409 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 OR1M1Q8NGA1 313 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 OR8B3Q8NGG8 313 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 PPP1R14AQ96A00 147 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 RNFT2Q96EX2 444 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 NEIL1Q96FI4 390 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-206ENST00000562610 OR8B2Q96RD0 313 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 SSBP3Q9BWW4 388 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-206ENST00000562610 AASSQ9UDR5 926 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 MIOXQ9UGB7 285 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 OR5V1Q9UGF6 321 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 OR52A1Q9UKL2 312 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 LRCH1Q9Y2L9 728 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 SNX5Q9Y5X3 404 aa13.51□□□□□ -0.25
COMMD4-206ENST00000562610 SNTNA6NMZ2 147 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 E9PQ18 207 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 CST4P01036 141 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 FAHP16930 419 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 GATA3P23771 443 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 GNB2P62879 340 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 ACTC1P68032 377 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 ACTA1P68133 377 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 OCLNQ16625 522 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 ODF4Q2M2E3 257 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 DCDC5Q6ZRR9 648 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 ENTHD1Q8IYW4 607 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 ZNF555Q8NEP9 628 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 SEMA6DQ8NFY4 1073 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 LRRC29Q8WV35 223 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 HIST1H2AAQ96QV6 131 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 TMPRSS13Q9BYE2 586 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 METTL17Q9H7H0 456 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-206ENST00000562610 SMPD3Q9NY59 655 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-206ENST00000562610 GNG8Q9UK08 70 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 PIGLQ9Y2B2 252 aa13.5□□□□□ -0.25
COMMD4-206ENST00000562610 LOC105371242A0A075B767 164 aa13.49□□□□□ -0.25
COMMD4-206ENST00000562610 LOC100130705A0A1B0GUX0 176 aa13.49□□□□□ -0.25
COMMD4-206ENST00000562610 OOEPA6NGQ2 149 aa13.49□□□□□ -0.25
COMMD4-206ENST00000562610 METTL15A6NJ78 407 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms