RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 DNAJC8O75937 253 aaPredicted RBP8.54□□□□□ -1.04
CLK3-205ENST00000561673 ANXA8P13928 327 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 EGR1P18146 543 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 SLC2A5P22732 501 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 CFL1P23528 166 aaKnown RBP8.54□□□□□ -1.04
CLK3-205ENST00000561673 NAA10P41227 235 aaPredicted RBP8.54□□□□□ -1.04
CLK3-205ENST00000561673 MTNR1AP48039 350 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 HCCSP53701 268 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 SLC9A3R2Q15599 337 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 CD276Q5ZPR3 534 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 BRD3OSQ6XYD6 125 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 FAM90A1Q86YD7 464 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.54□□□□□ -1.04
CLK3-205ENST00000561673 OR1M1Q8NGA1 313 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 PGAM5Q96HS1 289 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 LYZL4Q96KX0 146 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 SMURF1Q9HCE7 757 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 TRIM36Q9NQ86 728 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 KLHDC2Q9Y2U9 406 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 PKD1L1Q8TDX9 2849 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 TRAV40A0A0B4J280 105 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 MDFIC2A0A1B0GVS7 189 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 PRODHO43272 600 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 SFTPBP07988 381 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 HKR1P10072 659 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 ACKR3P25106 362 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 DAPP51397 102 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 RPS7P62081 194 aaKnown RBP8.53□□□□□ -1.04
CLK3-205ENST00000561673 CSNK2BP67870 215 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 ELF3P78545 371 aaPredicted RBP8.53□□□□□ -1.04
CLK3-205ENST00000561673 APOFQ13790 326 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 SNAPC1Q16533 368 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 SLC35D3Q5M8T2 416 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 TEX36Q5VZQ5 186 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 WDR82Q6UXN9 313 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 CSNK2A3Q8NEV1 391 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 LRRC29Q8WV35 223 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 UTP4Q969X6 686 aaKnown RBP8.53□□□□□ -1.04
CLK3-205ENST00000561673 SLC25A28Q96A46 364 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 ITPKCQ96DU7 683 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 TEAD3Q99594 435 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 PCGF1Q9BSM1 259 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 PAPOLGQ9BWT3 736 aaKnown RBP8.53□□□□□ -1.04
CLK3-205ENST00000561673 TEX12Q9BXU0 123 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 CADM1Q9BY67 442 aaKnown RBP8.53□□□□□ -1.04
CLK3-205ENST00000561673 RGCCQ9H4X1 137 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 ZMAT3Q9HA38 289 aaKnown RBP8.53□□□□□ -1.04
CLK3-205ENST00000561673 RNPEPL1Q9HAU8 725 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 SLC25A19Q9HC21 320 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 TVP23BQ9NYZ1 205 aa8.53□□□□□ -1.04
CLK3-205ENST00000561673 ZNF879B4DU55 563 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.52□□□□□ -1.05
CLK3-205ENST00000561673 CLDN34H7C241 214 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 DVL1O14640 695 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 CDIPTO14735 213 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 TMPRSS2O15393 492 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 GSC2O15499 205 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 TIPRLO75663 272 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 TOX4O94842 621 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 LIPFP07098 398 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 RNASE1P07998 156 aaKnown RBP8.52□□□□□ -1.05
CLK3-205ENST00000561673 MMP9P14780 707 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 MUC1P15941 1255 aaPredicted RBP8.52□□□□□ -1.05
CLK3-205ENST00000561673 ALOX5APP20292 161 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 CFHR2P36980 270 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 GNALP38405 381 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 CRISP1P54107 249 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 FOXL1Q12952 345 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 MICBQ29980 383 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 DEFB112Q30KQ8 113 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 GPR157Q5UAW9 335 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 FAHD1Q6P587 224 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 BTN2A1Q7KYR7 527 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 GALNT4Q8N4A0 578 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 PNLDC1Q8NA58 520 aaKnown RBP8.52□□□□□ -1.05
CLK3-205ENST00000561673 OR8B12Q8NGG6 310 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 OR5P3Q8WZ94 311 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 TAF15Q92804 592 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLK3-205ENST00000561673 SEH1LQ96EE3 360 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 NRBF2Q96F24 287 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 CCL13Q99616 98 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 TLNRD1Q9H1K6 362 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 PAPOLBQ9NRJ5 636 aaKnown RBP8.52□□□□□ -1.05
CLK3-205ENST00000561673 KAAG1Q9UBP8 84 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 LAMP5Q9UJQ1 280 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 LRP12Q9Y561 859 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 PCDHGB1Q9Y5G3 927 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 MPC1Q9Y5U8 109 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 CMYA5Q8N3K9 4069 aa8.52□□□□□ -1.05
CLK3-205ENST00000561673 CENPVL3A0A0U1RRI6 287 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 A0A1B0GW55 424 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 CCDC182A6NF36 153 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 ANXA2P2A6NMY6 339 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 ZNF850A8MQ14 1090 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 PSMD9O00233 223 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 ECDO95905 644 aaPredicted RBP8.51□□□□□ -1.05
CLK3-205ENST00000561673 CST4P01036 141 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 MRPL3P09001 348 aaKnown RBP8.51□□□□□ -1.05
CLK3-205ENST00000561673 DUX4L2P0CJ85 424 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 DUX4L3P0CJ86 424 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms