RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 FAM76BQ5HYJ3 339 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 LYPD2Q6UXB3 125 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 KRT77Q7Z794 578 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 ZNF679Q8IYX0 411 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 GALNT4Q8N4A0 578 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 GCSAMQ8N6F7 178 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 SEMA6DQ8NFY4 1073 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 ITPKCQ96DU7 683 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 MNTQ99583 582 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 PPP1R3EQ9H7J1 279 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 RNPEPL1Q9HAU8 725 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 ADGRL4Q9HBW9 690 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 BRD7Q9NPI1 651 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 A0A0U1RQV5 110 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 M0R129 80 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 SRSF10O75494 262 aaKnown RBP17.23■□□□□ 0.35
TPM1-232ENST00000561425 PPIAL4GP0DN37 164 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 ADRA2CP18825 462 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 HOXA4Q00056 320 aaPredicted RBP17.23■□□□□ 0.35
TPM1-232ENST00000561425 ZNF826PQ6ZT77 177 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 OR1M1Q8NGA1 313 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 CNN2Q99439 309 aaKnown RBP17.23■□□□□ 0.35
TPM1-232ENST00000561425 C19orf24Q9BVV8 132 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 MROQ9BYG7 248 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 S100A14Q9HCY8 104 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 C1orf123Q9NWV4 160 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 RRP15Q9Y3B9 282 aaKnown RBP17.23■□□□□ 0.35
TPM1-232ENST00000561425 MPC1Q9Y5U8 109 aa17.23■□□□□ 0.35
TPM1-232ENST00000561425 VENTXO95231 258 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 GRPP07492 148 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 MRPL3P09001 348 aaKnown RBP17.22■□□□□ 0.35
TPM1-232ENST00000561425 CD80P33681 288 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 TEX36Q5VZQ5 186 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 WDR25Q64LD2 544 aaPredicted RBP17.22■□□□□ 0.35
TPM1-232ENST00000561425 C19orf18Q8NEA5 215 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 OR8B3Q8NGG8 313 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 OR8S1Q8NH09 359 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 ZFAND2BQ8WV99 257 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 RAB40AQ8WXH6 277 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 OR8B2Q96RD0 313 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 PKP2Q99959 881 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 RBM4BQ9BQ04 359 aaKnown RBP17.22■□□□□ 0.35
TPM1-232ENST00000561425 ABCB9Q9NP78 766 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 TRIM36Q9NQ86 728 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 H2AFY2Q9P0M6 372 aaPredicted RBP17.22■□□□□ 0.35
TPM1-232ENST00000561425 OR5V1Q9UGF6 321 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 AUP1Q9Y679 476 aa17.22■□□□□ 0.35
TPM1-232ENST00000561425 WNK2Q9Y3S1 2297 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 KIR2DS1A0A191URI9 304 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 TMEM269A0A1B0GVZ9 245 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 OOEPA6NGQ2 149 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 NDUFA2O43678 99 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 PITPNBP48739 271 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 GNB2P62879 340 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 KCNJ8Q15842 424 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 KLF17Q5JT82 389 aaPredicted RBP17.21■□□□□ 0.35
TPM1-232ENST00000561425 NLRC3Q7RTR2 1065 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 GID4Q8IVV7 300 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 FTMTQ8N4E7 242 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 OR5P3Q8WZ94 311 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 IL4I1Q96RQ9 567 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 FGF23Q9GZV9 251 aaPredicted RBP17.21■□□□□ 0.35
TPM1-232ENST00000561425 OCEL1Q9H607 264 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 CLN6Q9NWW5 311 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 USE1Q9NZ43 259 aa17.21■□□□□ 0.35
TPM1-232ENST00000561425 TRAV38-1A0A0B4J264 116 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 IGHV2-70DA0A0C4DH43 119 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 PSMD9O00233 223 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 PHYHO14832 338 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 ALPLP05186 524 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 ATP6V1B1P15313 513 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 NPY4RP50391 375 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 HILS1P60008 231 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 IL5RAQ01344 420 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 GFOD2Q3B7J2 385 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 SFRP4Q6FHJ7 346 aaPredicted RBP17.2■□□□□ 0.34
TPM1-232ENST00000561425 ZNF322Q6U7Q0 402 aaPredicted RBP17.2■□□□□ 0.34
TPM1-232ENST00000561425 WDR82Q6UXN9 313 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 Q6ZSR3 168 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 SLC35F2Q8IXU6 374 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 OR8J1Q8NGP2 316 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 ZNF418Q8TF45 676 aaPredicted RBP17.2■□□□□ 0.34
TPM1-232ENST00000561425 PBOV1Q9GZY1 135 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 KAAG1Q9UBP8 84 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 CTSZQ9UBR2 303 aa17.2■□□□□ 0.34
TPM1-232ENST00000561425 WARS2Q9UGM6 360 aaKnown RBP17.2■□□□□ 0.34
TPM1-232ENST00000561425 NUFIP1Q9UHK0 495 aaKnown RBP17.2■□□□□ 0.34
TPM1-232ENST00000561425 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.19■□□□□ 0.34
TPM1-232ENST00000561425 EGR1P18146 543 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 HTR1FP30939 366 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 GNALP38405 381 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 RIDAP52758 137 aaKnown RBP17.19■□□□□ 0.34
TPM1-232ENST00000561425 CXCR4P61073 352 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 EGR3Q06889 387 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 PRDX4Q13162 271 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 TMED1Q13445 227 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 C11orf91Q3C1V1 193 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 FAM90A1Q86YD7 464 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 HPSE2Q8WWQ2 592 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 UPRTQ96BW1 309 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms