RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 DLX1P56177 255 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 ZNF121P58317 390 aaPredicted RBP9.59□□□□□ -0.87
USP3-220ENST00000561381 GRB2P62993 217 aaKnown RBP9.59□□□□□ -0.87
USP3-220ENST00000561381 MXRA7P84157 204 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 PDCD1Q15116 288 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 TIGD6Q17RP2 521 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 MIDNQ504T8 468 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 PDLIM3Q53GG5 364 aaPredicted RBP9.59□□□□□ -0.87
USP3-220ENST00000561381 WDR38Q5JTN6 314 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 C16orf89Q6UX73 402 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 WDR82Q6UXN9 313 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 C17orf107Q6ZR85 190 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 FAM57BQ71RH2 274 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 DPY19L4Q7Z388 723 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 LINC00471Q8N535 108 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 TMEM86BQ8N661 226 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 IQCF1Q8N6M8 205 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 FAM216BQ8N7L0 139 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 SCCPDHQ8NBX0 429 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 OR2T33Q8NG76 320 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 OR1M1Q8NGA1 313 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 SSMEM1Q8WWF3 244 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 REEP6Q96HR9 211 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 CITED1Q99966 193 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 ABHD6Q9BV23 337 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 SEMA6AQ9H2E6 1030 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 OPA3Q9H6K4 179 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 CNTD2Q9H8S5 307 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 BRD7Q9NPI1 651 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 ACTR3BQ9P1U1 418 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 KAAG1Q9UBP8 84 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 RHBDD3Q9Y3P4 386 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 A0A1B0GUS0 222 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 CLPSL1A2RUU4 121 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 ACOT8O14734 319 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 GPR137BO60478 399 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 TFF1P04155 84 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 SELLP14151 372 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 DDOSTP39656 456 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 IER3P46695 156 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 GMFBP60983 142 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 MZT1Q08AG7 82 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 MICBQ29980 383 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 MICAQ29983 383 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 GFOD2Q3B7J2 385 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 RHOUQ7L0Q8 258 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 VMO1Q7Z5L0 202 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 ERI1Q8IV48 349 aaKnown RBP9.58□□□□□ -0.88
USP3-220ENST00000561381 OR5T2Q8NGG2 359 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 OR6N2Q8NGY6 317 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 RNF133Q8WVZ7 376 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 INTS14Q96SY0 518 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 NIPSNAP1Q9BPW8 284 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 PAPOLGQ9BWT3 736 aaKnown RBP9.58□□□□□ -0.88
USP3-220ENST00000561381 DGCR6LQ9BY27 220 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 RNPEPL1Q9HAU8 725 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 ONECUT1Q9UBC0 465 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 DNAJB11Q9UBS4 358 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 BAIAP2Q9UQB8 552 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 ARL2BPQ9Y2Y0 163 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 SAMHD1Q9Y3Z3 626 aaKnown RBP9.58□□□□□ -0.88
USP3-220ENST00000561381 POMT1Q9Y6A1 747 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 CMYA5Q8N3K9 4069 aa9.58□□□□□ -0.88
USP3-220ENST00000561381 A0A1W2PRD5 423 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 A0A1W2PRF3 423 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 A0A1W2PRM7 423 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 RIIAD1A6NNX1 92 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 CDIPTO14735 213 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 ECDO95905 644 aaPredicted RBP9.57□□□□□ -0.88
USP3-220ENST00000561381 IFNGP01579 166 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 MUC1P15941 1255 aaPredicted RBP9.57□□□□□ -0.88
USP3-220ENST00000561381 ZNF3P17036 446 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 HSD11B1P28845 292 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 GRK5P34947 590 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 OPRL1P41146 370 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 SLC15A1P46059 708 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 MS4A2Q01362 244 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 IKZF1Q13422 519 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 SPATS1Q496A3 300 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 CDONQ4KMG0 1287 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 OR2T5Q6IEZ7 315 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 PIGWQ7Z7B1 504 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 LDLRAD3Q86YD5 345 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 LY6G5BQ8NDX9 201 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 OR2T29Q8NH02 315 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 LINC01006Q8NI28 216 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 TBC1D15Q8TC07 691 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 DYRK2Q92630 601 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 OTULINQ96BN8 352 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 CCT8L2Q96SF2 557 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 FGF23Q9GZV9 251 aaPredicted RBP9.57□□□□□ -0.88
USP3-220ENST00000561381 WDR13Q9H1Z4 485 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 TOR3AQ9H497 397 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 REEP1Q9H902 201 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 SIRT7Q9NRC8 400 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 CMC2Q9NRP2 79 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 SNTG1Q9NSN8 517 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 NDE1Q9NXR1 346 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 TAS2R1Q9NYW7 299 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 RNF114Q9Y508 228 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms