RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ERI3O43414 337 aaKnown RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 LMX1BO60663 402 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 RAD1O60671 282 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 PFDN1O60925 122 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 SUPT3HO75486 399 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 AQP8O94778 261 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 KLF8O95600 359 aaPredicted RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 TCRBP04435 133 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 GNAO1P09471 354 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 PGA5P0DJD9 388 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 C8orf88P0DMB2 117 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 OR5H8P0DN80 308 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 THRAP10827 490 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 LAMP1P11279 417 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 ZNF35P13682 527 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 PGAM2P15259 253 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 CD1EP15812 388 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 RAB3AP20336 220 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 FUT3P21217 361 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 IGHV1-2P23083 117 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 ANOS1P23352 680 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 MARK3P27448 753 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 GTF2H1P32780 548 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 GGT2P36268 569 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 CEACAM6P40199 344 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 KIR3DL2P43630 455 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 RPS9P46781 194 aaKnown RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 CAPZBP47756 277 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 OR3A4PP47883 348 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 P2RY4P51582 365 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 MNAT1P51948 309 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 RND2P52198 227 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 APOC4P55056 127 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 CLDN12P56749 244 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 UBE2NP61088 152 aaKnown RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 RPS23P62266 143 aaKnown RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 S100A12P80511 92 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 FAM3AP98173 230 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 MXD1Q05195 221 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 ADIGQ0VDE8 80 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 KLF9Q13886 244 aaPredicted RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 POU6F1Q14863 301 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 SIX1Q15475 284 aaPredicted RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 TAF1AQ15573 450 aaPredicted RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 SLC9A3R2Q15599 337 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 ZNF726P1Q15940 193 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 MOGQ16653 247 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 TBC1D28Q2M2D7 210 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 KRTAP19-4Q3LI73 84 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 ACTBL2Q562R1 376 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 TTC32Q5I0X7 151 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 METTL21CQ5VZV1 264 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 UFSP1Q6NVU6 142 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 METTL7BQ6UX53 244 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 C2orf66Q6UXQ4 117 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 SPNS3Q6ZMD2 512 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 RTL4Q6ZR62 310 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 MOB1BQ7L9L4 216 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 TAC4Q86UU9 113 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 COMMD7Q86VX2 200 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 CALHM1Q8IU99 346 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 FBXO16Q8IX29 292 aaPredicted RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 DAW1Q8N136 415 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 ZADH2Q8N4Q0 377 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 C2orf73Q8N5S3 287 aaPredicted RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 C4orf32Q8N8J7 132 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 COX18Q8N8Q8 333 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 AQP11Q8NBQ7 271 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 PXT1Q8NFP0 134 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 OR11H7Q8NGC8 314 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 OR2D3Q8NGH3 330 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 OR5M1Q8NGP8 315 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 OR6N1Q8NGY5 312 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 COQ8AQ8NI60 647 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 NEIL3Q8TAT5 605 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 NEK7Q8TDX7 302 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 AGAP11Q8TF27 550 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 BLNKQ8WV28 456 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 RXFP2Q8WXD0 754 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 TAF15Q92804 592 aaKnown RBP eCLIP1.64□□□□□ -2.15
RTF1-207ENST00000561076 FGF14Q92915 247 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 UCN3Q969E3 161 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 C11orf52Q96A22 123 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 DCPSQ96C86 337 aaKnown RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 SLC25A38Q96DW6 304 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 ZHX1-C8orf76Q96EF9 292 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 SNF8Q96H20 258 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 ZNF488Q96MN9 340 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 SMIM14Q96QK8 99 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 METTL26Q96S19 204 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 TEAD3Q99594 435 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 TMED9Q9BVK6 235 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 TIPINQ9BVW5 301 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 KIFC1Q9BW19 673 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 CDCA4Q9BXL8 241 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 PECRQ9BY49 303 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 GABARAPL3Q9BY60 117 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 SLC29A3Q9BZD2 475 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 SLC19A3Q9BZV2 496 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 CHRNA10Q9GZZ6 450 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms