RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 Q8NA96 180 aa9.43□□□□□ -0.9
SNRPA1-211ENST00000560433 SMIM4Q8WVI0 70 aa9.43□□□□□ -0.9
SNRPA1-211ENST00000560433 BCL2L2Q92843 193 aaPredicted RBP9.43□□□□□ -0.9
SNRPA1-211ENST00000560433 CCDC120Q96HB5 630 aa9.43□□□□□ -0.9
SNRPA1-211ENST00000560433 GPR137Q96N19 417 aa9.43□□□□□ -0.9
SNRPA1-211ENST00000560433 STARD10Q9Y365 291 aa9.43□□□□□ -0.9
SNRPA1-211ENST00000560433 KALRNO60229 2985 aa9.43□□□□□ -0.9
SNRPA1-211ENST00000560433 TPRP12270 2363 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 WIPF3A6NGB9 483 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 XRCC3O43542 346 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 MTRF1O75570 445 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 IL32P24001 234 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 VEGFCP49767 419 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 SFRP4Q6FHJ7 346 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 PGAP1Q75T13 922 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 PIGCQ92535 297 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 UPRTQ96BW1 309 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 NEURL2Q9BR09 285 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 ELL3Q9HB65 397 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 RBFOX1Q9NWB1 397 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 PTTG3PQ9NZH4 202 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 MRPS28Q9Y2Q9 187 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 FAM215AQ9Y5M1 114 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 CACNG2Q9Y698 323 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 TRAV6A0A075B6T7 132 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 AHRRA9YTQ3 701 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 C1QTNF9BB2RNN3 333 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 SPRY1O43609 319 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 ANGPTL7O43827 346 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 GMDSO60547 372 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 TNFSF13O75888 250 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 MPIG6BO95866 241 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 C1QTNF9P0C862 333 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 BTCP35070 178 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 NR4A2P43354 598 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 IDH3GP51553 393 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 GK2Q14410 553 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 GUSBP1Q15486 140 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 NRN1LQ496H8 165 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 FAM180AQ6UWF9 173 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 OR8S1Q8NH09 359 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 FCAMRQ8WWV6 532 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 WNT2BQ93097 391 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 POM121L2Q96KW2 1035 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 CMTM3Q96MX0 182 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 MRI1Q9BV20 369 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 C1QTNF5Q9BXJ0 243 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 CHST5Q9GZS9 411 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 DIABLOQ9NR28 239 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 ING4Q9UNL4 249 aa9.42□□□□□ -0.9
SNRPA1-211ENST00000560433 IGKV1-27A0A075B6S5 117 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 A0A0B4J293 547 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 hCG_38984A0A1B0GV85 526 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 TMEM235A6NFC5 223 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 TTLL8A6PVC2 850 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 LDLRAD4O15165 306 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 HNRNPCP07910 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 FAM157BP0CG42 384 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 CD37P11049 281 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 SERPINA2P20848 420 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 GIFP27352 417 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 WNT5AP41221 380 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 ERVS71-1P61550 626 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 PLP2Q04941 152 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 RIPPLY1Q0D2K3 151 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 CHST4Q8NCG5 386 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 FOXRED1Q96CU9 486 aaPredicted RBP9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 STARD4Q96DR4 205 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 C3orf80F5H4A9 247 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 LILRA1O75019 489 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 CRTAPO75718 401 aaPredicted RBP9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 GNB3P16520 340 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 CFPP27918 469 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 THBS4P35443 961 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 MTCP1P56278 107 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 QRFPP83859 136 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 RSBN1Q5VWQ0 802 aaPredicted RBP9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 NSUN5P2Q63ZY6 315 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 OLFML2AQ68BL7 652 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 PLET1Q6UQ28 207 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 Q6ZT83 130 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 CXorf67Q86X51 503 aaPredicted RBP9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 HPS1Q92902 700 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 BEX2Q9BXY8 128 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 BEX1Q9HBH7 125 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 TBCCD1Q9NVR7 557 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 MCUBQ9NWR8 336 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 GPR160Q9UJ42 338 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 TINAGQ9UJW2 476 aa9.41□□□□□ -0.9
SNRPA1-211ENST00000560433 A0A0A6YYD4 124 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 ZNF850A8MQ14 1090 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 A8MV72 311 aaPredicted RBP9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 GABARAPH6UMI1 98 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 NRASP01111 189 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 CRYABP02511 175 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 ERCC1P07992 297 aaPredicted RBP9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 APLNRP35414 380 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 ARR3P36575 388 aa9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 UBE2NP61088 152 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-211ENST00000560433 SNTB2Q13425 540 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms