RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RNF141Q8WVD5 230 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 ANK1P16157 1881 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 ARPC3O15145 178 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 PRICKLE4Q2TBC4 344 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 PTOV1Q86YD1 416 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 CT55Q8WUE5 264 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 TMIGD3P0DMS9 266 aaPredicted RBP12.11□□□□□ -0.47
TRAF3-208ENST00000560371 CNR1P21554 472 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 FZD5Q13467 585 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 SNTB1Q13884 538 aaKnown RBP12.11□□□□□ -0.47
TRAF3-208ENST00000560371 NKG7Q16617 165 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 MOB3BQ86TA1 216 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 NDUFB11Q9NX14 153 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 PARP14Q460N5 1801 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 A0A1B0GTL3 188 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 ST8SIA5O15466 376 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 FCGR2CP31995 323 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 DMRTC1Q5HYR2 192 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 ABI3BPQ7Z7G0 1075 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 CDCA4Q9BXL8 241 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 TCFL5Q9UL49 500 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 CDK5R1Q15078 307 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 OR2Y1Q8NGV0 311 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 LYZL6O75951 148 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 TOMM34Q15785 309 aaPredicted RBP12.1□□□□□ -0.47
TRAF3-208ENST00000560371 BHLHA9Q7RTU4 235 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 SFT2D1Q8WV19 159 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 ADAT1Q9BUB4 502 aaKnown RBP12.1□□□□□ -0.47
TRAF3-208ENST00000560371 SERTM2A0A1B0GWG4 89 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 CDC14BO60729 498 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 PPP1CAP62136 330 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 OPCMLQ14982 345 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 PAQR6Q6TCH4 344 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 C15orf54Q8N8G6 183 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 RNF32Q9H0A6 362 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 DUSP15Q9H1R2 295 aaPredicted RBP12.1□□□□□ -0.47
TRAF3-208ENST00000560371 FAM60AQ9NP50 221 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 ZFP92A6NM28 416 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 IFITM5A6NNB3 132 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 GABRA1P14867 456 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 MGMTP16455 207 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 C16orf47Q6ZP98 133 aaPredicted RBP12.1□□□□□ -0.47
TRAF3-208ENST00000560371 SEC22CQ9BRL7 303 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 RAB1BQ9H0U4 201 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 C11orf54Q9H0W9 315 aaPredicted RBP12.1□□□□□ -0.47
TRAF3-208ENST00000560371 RNF150Q9ULK6 438 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 KCNE3Q9Y6H6 103 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 C21orf140B9A014 251 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 SOX8P57073 446 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 OR10A3P58181 314 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 CTU2Q2VPK5 515 aaKnown RBP12.1□□□□□ -0.47
TRAF3-208ENST00000560371 TIGD3Q6B0B8 471 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 CXorf67Q86X51 503 aaPredicted RBP12.1□□□□□ -0.47
TRAF3-208ENST00000560371 OR13C5Q8NGS8 318 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 CCL17Q92583 94 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 ZNF391Q9UJN7 358 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 MED12Q93074 2177 aa12.1□□□□□ -0.47
TRAF3-208ENST00000560371 OR5G3P0C626 314 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 SRP14P37108 136 aaKnown RBP12.09□□□□□ -0.47
TRAF3-208ENST00000560371 TSEN54Q7Z6J9 526 aaKnown RBP12.09□□□□□ -0.47
TRAF3-208ENST00000560371 TRMT61AQ96FX7 289 aaKnown RBP12.09□□□□□ -0.47
TRAF3-208ENST00000560371 FZR1Q9UM11 496 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 CT45A10P0DMU9 189 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 ELLP55199 621 aaPredicted RBP12.09□□□□□ -0.47
TRAF3-208ENST00000560371 A0A1B0GTQ1 180 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 YBX1P67809 324 aaKnown RBP12.09□□□□□ -0.47
TRAF3-208ENST00000560371 PURGQ9UJV8 347 aaKnown RBP12.09□□□□□ -0.47
TRAF3-208ENST00000560371 SSSCA1O60232 199 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 SRD5A2P31213 254 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 GABARAPL1Q9H0R8 117 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 SBF1O95248 1867 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 PTBP1P26599 531 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAF3-208ENST00000560371 Q8IYB0 196 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 DRAXINQ8NBI3 349 aaPredicted RBP12.09□□□□□ -0.47
TRAF3-208ENST00000560371 ISG20L2Q9H9L3 353 aaKnown RBP12.09□□□□□ -0.47
TRAF3-208ENST00000560371 CACFD1Q9UGQ2 172 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 FABP7O15540 132 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 HOXC8P31273 242 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 ZNF683Q8IZ20 524 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 TMEM230Q96A57 120 aa12.09□□□□□ -0.47
TRAF3-208ENST00000560371 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.47
TRAF3-208ENST00000560371 UBE2IP63279 158 aaKnown RBP12.08□□□□□ -0.47
TRAF3-208ENST00000560371 ZNF117Q03924 483 aa12.08□□□□□ -0.47
TRAF3-208ENST00000560371 LIMS2Q7Z4I7 341 aa12.08□□□□□ -0.47
TRAF3-208ENST00000560371 OR13C8Q8NGS7 320 aa12.08□□□□□ -0.47
TRAF3-208ENST00000560371 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.47
TRAF3-208ENST00000560371 GON7Q9BXV9 100 aa12.08□□□□□ -0.47
TRAF3-208ENST00000560371 A0A1W2PR80 420 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 SERTM1A2A2V5 107 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 CCL4P13236 92 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 ADRA2CP18825 462 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 OR10AD1Q8NGE0 317 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 ZNRF4Q8WWF5 429 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 JUNBP17275 347 aaPredicted RBP12.08□□□□□ -0.48
TRAF3-208ENST00000560371 HRH1P35367 487 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 OR2G3Q8NGZ4 309 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 ADAM19Q9H013 955 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 RPS10-NUDT3A0A1W2PQS6 291 aa12.08□□□□□ -0.48
TRAF3-208ENST00000560371 ACKR3P25106 362 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms