RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 Q7L0L9 218 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 KCTD9Q7L273 389 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 PARS2Q7L3T8 475 aaKnown RBP5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 ZNF627Q7L945 461 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 TRAPPC6BQ86SZ2 158 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 FJX1Q86VR8 437 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 LYPD6Q86Y78 171 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 YAF2Q8IY57 180 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 HIST3H2BBQ8N257 126 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 FAM24BQ8N5W8 94 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 LRRC75AQ8NAA5 344 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 LINC01555Q8NAE3 123 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 OR2A1Q8NGT9 310 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 SECTM1Q8WVN6 248 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 HPSE2Q8WWQ2 592 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 MAFIPQ8WZ33 124 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 ANKRD9Q96BM1 317 aaPredicted RBP5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 R3HDM4Q96D70 268 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 MARS2Q96GW9 593 aaKnown RBP5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 SMIM10Q96HG1 83 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 SLC22A12Q96S37 553 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 INTS14Q96SY0 518 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 NMNAT3Q96T66 252 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 GINS3Q9BRX5 216 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 MRPL37Q9BZE1 423 aaKnown RBP5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 METTL9Q9H1A3 318 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 SLC26A1Q9H2B4 701 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 HIPK2Q9H2X6 1198 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 SRMSQ9H3Y6 488 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 SPACA1Q9HBV2 294 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 LYRM4Q9HD34 91 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 KCNJ16Q9NPI9 418 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 DOK5Q9P104 306 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 IKZF2Q9UKS7 526 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 PLAGL1Q9UM63 463 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 GPR132Q9UNW8 380 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 DHDHQ9UQ10 334 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 INSL5Q9Y5Q6 135 aa5.28□□□□□ -1.56
SNRPA1-209ENST00000560307 MYO10Q9HD67 2058 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 A0A0G2JN53 185 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 C13orf42A0A1B0GVH6 325 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 TMEM269A0A1B0GVZ9 245 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 MBD3L4A6NDZ8 208 aaPredicted RBP5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 MBD3L3A6NE82 208 aaPredicted RBP5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 TLCD2A6NGC4 264 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 GLOD5A6NK44 160 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 IFITM10A6NMD0 228 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 LEFTY2O00292 366 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 DCTN6O00399 190 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF217O75362 1048 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 RPP14O95059 124 aaKnown RBP5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 GPANK1O95872 356 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 SERPINA5P05154 406 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 OR5AC1P0C628 307 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 OR8U9P0C7N5 309 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 PNMTP11086 282 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 CPMP14384 443 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF28P17035 718 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 NDUFB7P17568 137 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 GABRR1P24046 479 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 PSMB5P28074 263 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 HSD11B1P28845 292 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 CRABP1P29762 137 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF84P51523 738 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ADPRHP54922 357 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 CLDN2P57739 230 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 OR2B8PP59922 312 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC35A1P78382 337 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF117Q03924 483 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 GAGE1Q13065 139 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 GPR18Q14330 331 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC17A1Q14916 467 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ITPRIPL2Q3MIP1 535 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 HIKESHIQ53FT3 197 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 MESTQ5EB52 335 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 RPL7L1Q6DKI1 246 aaKnown RBP5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 KCTD18Q6PI47 426 aaPredicted RBP5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 DLK2Q6UY11 383 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 NPSR1Q6W5P4 371 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 MED25Q71SY5 747 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ERN2Q76MJ5 926 aaKnown RBP5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ADIPOR2Q86V24 386 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 LHFPL1Q86WI0 220 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 GKN2Q86XP6 184 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF679Q8IYX0 411 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 CMTM8Q8IZV2 173 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 PRSS35Q8N3Z0 413 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 FAM71E2Q8N5Q1 922 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 OR52E1Q8NGJ3 308 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 OR8U1Q8NH10 309 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 OTOSQ8NHW6 89 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 STT3BQ8TCJ2 826 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 GRHL3Q8TE85 626 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 CASTOR1Q8WTX7 329 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNRF4Q8WWF5 429 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 METTL21AQ8WXB1 218 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 SMARCD2Q92925 531 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 SPSB4Q96A44 273 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 IP6K3Q96PC2 410 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 CDCA3Q99618 268 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms