RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 CCDC124Q96CT7 223 aaKnown RBP10.45□□□□□ -0.74
SNX1-209ENST00000559961 ASB9Q96DX5 294 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 FEVQ99581 238 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 SLITRK2Q9H156 845 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 RASSF4Q9H2L5 321 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 DPAGT1Q9H3H5 408 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 NIPAL2Q9H841 368 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 ACOXLQ9NUZ1 547 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 ONECUT1Q9UBC0 465 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 ZNF391Q9UJN7 358 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 MPC1Q9Y5U8 109 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 POMT1Q9Y6A1 747 aa10.45□□□□□ -0.74
SNX1-209ENST00000559961 IGHV3OR15-7A0A075B7D8 119 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 A0A1B0GVI7 797 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 TCRBV5S2A0A599 114 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 ARRDC5A6NEK1 342 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 FAM181BA6NEQ2 426 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 TMEM210A6NLX4 147 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 C22orf46C9J442 243 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 GSC2O15499 205 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 CLUP10909 449 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 FAM3AP98173 230 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 BLMHQ13867 455 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 PRR31Q5SQ13 230 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 TEX36Q5VZQ5 186 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 KCTD18Q6PI47 426 aaPredicted RBP10.44□□□□□ -0.74
SNX1-209ENST00000559961 FIP1L1Q6UN15 594 aaKnown RBP10.44□□□□□ -0.74
SNX1-209ENST00000559961 KRT77Q7Z794 578 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 COMMD2Q86X83 199 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 OR1M1Q8NGA1 313 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 LRTOMTQ8WZ04 291 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 C12orf43Q96C57 262 aaKnown RBP10.44□□□□□ -0.74
SNX1-209ENST00000559961 MED30Q96HR3 178 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 MED20Q9H944 212 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 PDP1Q9P0J1 537 aaPredicted RBP10.44□□□□□ -0.74
SNX1-209ENST00000559961 KAAG1Q9UBP8 84 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 LAMP5Q9UJQ1 280 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 TANC2Q9HCD6 1990 aa10.44□□□□□ -0.74
SNX1-209ENST00000559961 NBEAL1Q6ZS30 2694 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 IGHV1-69DA0A0B4J2H0 117 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 CENPVL3A0A0U1RRI6 287 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 FAM183AA6NL82 134 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 AQP12BA6NM10 295 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 CDIPTO14735 213 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 TNFRSF13BO14836 293 aaPredicted RBP10.43□□□□□ -0.74
SNX1-209ENST00000559961 PRODHO43272 600 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 LHBP01229 141 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 IGHV1-69P01742 117 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 ANXA8P13928 327 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 OMGP23515 440 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 RAG2P55895 527 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 ACTR3P61158 418 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 RPL15P61313 204 aaKnown RBP10.43□□□□□ -0.74
SNX1-209ENST00000559961 GUCA2AQ02747 115 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 POU4F2Q12837 409 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 GINS1Q14691 196 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 TUSC1Q2TAM9 212 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 CDONQ4KMG0 1287 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 PLBD1Q6P4A8 553 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 Q6YL49 198 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 THAP5Q7Z6K1 395 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 FAM90A1Q86YD7 464 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 AQP12AQ8IXF9 295 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 GALNT4Q8N4A0 578 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 GCSAMQ8N6F7 178 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 IQCF1Q8N6M8 205 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 NPRL2Q8WTW4 380 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 PIGCQ92535 297 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 ITFG2Q969R8 447 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 DACT3Q96B18 629 aaPredicted RBP10.43□□□□□ -0.74
SNX1-209ENST00000559961 RNF170Q96K19 258 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 DMRTB1Q96MA1 342 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 CCL13Q99616 98 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 NIPSNAP1Q9BPW8 284 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 THTPAQ9BU02 230 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 PRRG3Q9BZD7 231 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 C1orf21Q9H246 121 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 RHBDD3Q9Y3P4 386 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 MMP24Q9Y5R2 645 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 KPTNQ9Y664 436 aa10.43□□□□□ -0.74
SNX1-209ENST00000559961 ANK2Q01484 3957 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 MDFIC2A0A1B0GVS7 189 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 FAM107AO95990 144 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 PAHP00439 452 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 SFTPBP07988 381 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 OSMP13725 252 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 MDKP21741 143 aaPredicted RBP10.42□□□□□ -0.74
SNX1-209ENST00000559961 OPRL1P41146 370 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 MAP2K3P46734 347 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 GMFBP60983 142 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 MS4A2Q01362 244 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 IKZF1Q13422 519 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 SLC35D3Q5M8T2 416 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 LCN1P1Q5VSP4 162 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 TREML4Q6UXN2 200 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 GDPGP1Q6ZNW5 385 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 SPATA24Q86W54 205 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 ZDHHC23Q8IYP9 409 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 OR10Z1Q8NGY1 313 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 OTOSQ8NHW6 89 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms