RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 FAM183AA6NL82 134 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 PRR23D1E9PI22 279 aaPredicted RBP10.16□□□□□ -0.78
SPG11-219ENST00000559822 DVL1O14640 695 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 PRODHO43272 600 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 HMGN1P05114 100 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 LYNP07948 512 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 PRR23D2P0DMB1 279 aaPredicted RBP10.16□□□□□ -0.78
SPG11-219ENST00000559822 MMP9P14780 707 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 ANOS1P23352 680 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 OPRL1P41146 370 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 GSK3AP49840 483 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 MS4A2Q01362 244 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 GFOD2Q3B7J2 385 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 Q6YL49 198 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 PRSS45Q7RTY3 260 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 TIGD4Q8IY51 512 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 CMTM4Q8IZR5 234 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 IQCF1Q8N6M8 205 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 SCCPDHQ8NBX0 429 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 CCDC197Q8NCU1 140 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 TBC1D15Q8TC07 691 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 SSMEM1Q8WWF3 244 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 ST8SIA4Q92187 359 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 CCDC124Q96CT7 223 aaKnown RBP10.16□□□□□ -0.78
SPG11-219ENST00000559822 TBX15Q96SF7 602 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 RTL8AQ9BWD3 113 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 CHID1Q9BWS9 393 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 C1orf21Q9H246 121 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 OR51V1Q9H2C8 321 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 NIPAL2Q9H841 368 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 YY1AP1Q9H869 796 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 MED20Q9H944 212 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 ZNF556Q9HAH1 456 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 BEX1Q9HBH7 125 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 ACOXLQ9NUZ1 547 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 RPUSD1Q9UJJ7 312 aaKnown RBP10.16□□□□□ -0.78
SPG11-219ENST00000559822 MPC1Q9Y5U8 109 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 SOX21Q9Y651 276 aaPredicted RBP10.16□□□□□ -0.78
SPG11-219ENST00000559822 KPTNQ9Y664 436 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 IGHV3OR15-7A0A075B7D8 119 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 IGHV1-69DA0A0B4J2H0 117 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 FAM181BA6NEQ2 426 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 TMEM210A6NLX4 147 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 AQP12BA6NM10 295 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 NDUFB3O43676 98 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 E2F6O75461 281 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 KNG1P01042 644 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 IGHV1-69P01742 117 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 MELTFP08582 738 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 MDKP21741 143 aaPredicted RBP10.15□□□□□ -0.78
SPG11-219ENST00000559822 POU1F1P28069 291 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 HOXA4Q00056 320 aaPredicted RBP10.15□□□□□ -0.78
SPG11-219ENST00000559822 RUSC1-AS1Q66K80 236 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 FIP1L1Q6UN15 594 aaKnown RBP10.15□□□□□ -0.78
SPG11-219ENST00000559822 WDR82Q6UXN9 313 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 C17orf107Q6ZR85 190 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 AQP12AQ8IXF9 295 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 GALNT4Q8N4A0 578 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 OTOSQ8NHW6 89 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 LHX4Q969G2 390 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 ITFG2Q969R8 447 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 SIRPDQ9H106 197 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 TLNRD1Q9H1K6 362 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 CNTD2Q9H8S5 307 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 BRD7Q9NPI1 651 aa10.15□□□□□ -0.78
SPG11-219ENST00000559822 CAB39Q9Y376 341 aaPredicted RBP10.15□□□□□ -0.78
SPG11-219ENST00000559822 NKX6-3A6NJ46 265 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 NDUFA7O95182 113 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 FAM107AO95990 144 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 OMGP23515 440 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 RAG2P55895 527 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 PSMA6P60900 246 aaKnown RBP10.14□□□□□ -0.79
SPG11-219ENST00000559822 ARF6P62330 175 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 CSNK2BP67870 215 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 GINS1Q14691 196 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 CDONQ4KMG0 1287 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 KLHL12Q53G59 568 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 LRRC10Q5BKY1 277 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 WDR38Q5JTN6 314 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 SLC35D3Q5M8T2 416 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 PLBD1Q6P4A8 553 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 TREML4Q6UXN2 200 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 WDR86Q86TI4 376 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 C11orf53Q8IXP5 236 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 ADGRG5Q8IZF4 528 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 PAPD5Q8NDF8 572 aaKnown RBP10.14□□□□□ -0.79
SPG11-219ENST00000559822 OR10Z1Q8NGY1 313 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 THEM6Q8WUY1 208 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 LRTOMTQ8WZ04 291 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 DYRK2Q92630 601 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 ITPKCQ96DU7 683 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 HIST1H2AAQ96QV6 131 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 CCL13Q99616 98 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 CHIAQ9BZP6 476 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 DNTTIP1Q9H147 329 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 RASSF4Q9H2L5 321 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 TNFRSF19Q9NS68 423 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 PDP1Q9P0J1 537 aaPredicted RBP10.14□□□□□ -0.79
SPG11-219ENST00000559822 DNAJB11Q9UBS4 358 aa10.14□□□□□ -0.79
SPG11-219ENST00000559822 RHBDD3Q9Y3P4 386 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms