RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TIGD6Q17RP2 521 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 C2orf68Q2NKX9 166 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 STUMQ69YW2 141 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 CMTM4Q8IZR5 234 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 LINC00471Q8N535 108 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 FAM216BQ8N7L0 139 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 ZNF511Q8NB15 262 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 OR9Q2Q8NGE9 314 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 REEP6Q96HR9 211 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 NSMCE2Q96MF7 247 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 CCL13Q99616 98 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 DNTTIP1Q9H147 329 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 TOR3AQ9H497 397 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 SIRT7Q9NRC8 400 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 CENPMQ9NSP4 180 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 LYVE1Q9Y5Y7 322 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 DHRS12A0PJE2 317 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 BTBD17A6NE02 478 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 ZNF593O00488 134 aaPredicted RBP10.74□□□□□ -0.69
TPM1-220ENST00000559556 ACOT8O14734 319 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 NPFFO15130 113 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 TBX1O43435 398 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 KRT36O76013 467 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 GYPBP06028 91 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 TGFBR2P37173 567 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 NAA10P41227 235 aaPredicted RBP10.74□□□□□ -0.69
TPM1-220ENST00000559556 SLC15A1P46059 708 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 TGM4P49221 684 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 CX3CR1P49238 355 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 SLC25A1P53007 311 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 CRMP1Q14194 572 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 KLHL12Q53G59 568 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 ATPAF1Q5TC12 328 aaPredicted RBP10.74□□□□□ -0.69
TPM1-220ENST00000559556 ZNF770Q6IQ21 691 aaPredicted RBP10.74□□□□□ -0.69
TPM1-220ENST00000559556 RASSF6Q6ZTQ3 369 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 PRSS45Q7RTY3 260 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 Q8N7P7 452 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 OR52H1Q8NGJ2 320 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 ITPKCQ96DU7 683 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 DCTN5Q9BTE1 182 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 TBC1D23Q9NUY8 699 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 N6AMT1Q9Y5N5 214 aa10.74□□□□□ -0.69
TPM1-220ENST00000559556 NDUFB3O43676 98 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 APOC1P02654 83 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 ANXA2P07355 339 aaKnown RBP10.73□□□□□ -0.69
TPM1-220ENST00000559556 CLUP10909 449 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 SELLP14151 372 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 AMY2BP19961 511 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 CFL1P23528 166 aaKnown RBP10.73□□□□□ -0.69
TPM1-220ENST00000559556 EEF1B2P24534 225 aaKnown RBP10.73□□□□□ -0.69
TPM1-220ENST00000559556 HSD11B1P28845 292 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 SAA4P35542 130 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 MSX2P35548 267 aaPredicted RBP10.73□□□□□ -0.69
TPM1-220ENST00000559556 GSK3AP49840 483 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 BLVRAP53004 296 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 KLRD1Q13241 179 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 LRRC10Q5BKY1 277 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 SAMD4BQ5PRF9 694 aaKnown RBP10.73□□□□□ -0.69
TPM1-220ENST00000559556 LINC01590Q5TEZ4 76 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 C1orf122Q6ZSJ8 110 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 C1QL4Q86Z23 238 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 PGAM4Q8N0Y7 254 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 GALNT4Q8N4A0 578 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 CSNK2A3Q8NEV1 391 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 OR6K6Q8NGW6 343 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 OR10Z1Q8NGY1 313 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 OR5R1Q8NH85 324 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 RNF133Q8WVZ7 376 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 TNFRSF14Q92956 283 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 SGK3Q96BR1 496 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 SEH1LQ96EE3 360 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 PPP1R3EQ9H7J1 279 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 SP140LQ9H930 580 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 HAO2Q9NYQ3 351 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 BAIAP2Q9UQB8 552 aa10.73□□□□□ -0.69
TPM1-220ENST00000559556 ZNF816-ZNF321PA0A0X1KG74 233 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 CDIPTO14735 213 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 GNALP38405 381 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 MAGEA2P43356 314 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 DLX1P56177 255 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 ZNF121P58317 390 aaPredicted RBP10.72□□□□□ -0.69
TPM1-220ENST00000559556 MXRA7P84157 204 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 EGR3Q06889 387 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 ACSM1Q08AH1 577 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 IKZF1Q13422 519 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 EIF2B1Q14232 305 aaKnown RBP10.72□□□□□ -0.69
TPM1-220ENST00000559556 SNCBQ16143 134 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 ZNF788Q6ZQV5 615 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 FAM57BQ71RH2 274 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 FTMTQ8N4E7 242 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 OR4Q3Q8NH05 313 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 RAB3IPQ96QF0 476 aaPredicted RBP10.72□□□□□ -0.69
TPM1-220ENST00000559556 MICU1Q9BPX6 476 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 ABHD6Q9BV23 337 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 PAPOLGQ9BWT3 736 aaKnown RBP10.72□□□□□ -0.69
TPM1-220ENST00000559556 TSSK6Q9BXA6 273 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 RHBDD3Q9Y3P4 386 aa10.72□□□□□ -0.69
TPM1-220ENST00000559556 MEIOCA2RUB1 952 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 NKX6-3A6NJ46 265 aa10.71□□□□□ -0.69
TPM1-220ENST00000559556 TMEM210A6NLX4 147 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms