RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 MRPS34P82930 218 aaKnown RBP9.24□□□□□ -0.93
TPM1-210ENST00000558264 ATPAF1Q5TC12 328 aaPredicted RBP9.24□□□□□ -0.93
TPM1-210ENST00000558264 FOXL2NBQ6ZUU3 175 aa9.24□□□□□ -0.93
TPM1-210ENST00000558264 GALNTL5Q7Z4T8 443 aa9.24□□□□□ -0.93
TPM1-210ENST00000558264 CDH24Q86UP0 819 aa9.24□□□□□ -0.93
TPM1-210ENST00000558264 BATF2Q8N1L9 274 aa9.24□□□□□ -0.93
TPM1-210ENST00000558264 SGK3Q96BR1 496 aa9.24□□□□□ -0.93
TPM1-210ENST00000558264 FOXB1Q99853 325 aa9.24□□□□□ -0.93
TPM1-210ENST00000558264 ZNF703Q9H7S9 590 aaPredicted RBP9.24□□□□□ -0.93
TPM1-210ENST00000558264 TMEM9BQ9NQ34 198 aa9.24□□□□□ -0.93
TPM1-210ENST00000558264 VSIG4Q9Y279 399 aa9.24□□□□□ -0.93
TPM1-210ENST00000558264 ARPC4-TTLL3A0A0A6YYG9 625 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 SNRPGP15A8MWD9 76 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 SULT1C2O00338 296 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 CCSO14618 274 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 ANGPTL7O43827 346 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 CPN1P15169 458 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 S100A1P23297 94 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 ZNF133P52736 654 aaPredicted RBP9.23□□□□□ -0.93
TPM1-210ENST00000558264 FOXG1P55316 489 aaPredicted RBP9.23□□□□□ -0.93
TPM1-210ENST00000558264 TMEM50BP56557 158 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 PER3P56645 1201 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 GNG2P59768 71 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 SRSF6Q13247 344 aaKnown RBP9.23□□□□□ -0.93
TPM1-210ENST00000558264 TSPO2Q5TGU0 170 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 ABLIM2Q6H8Q1 611 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 RAB12Q6IQ22 244 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 OR2AK2Q8NG84 335 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 SPTSSAQ969W0 71 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 PTX4Q96A99 478 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 MRGPRFQ96AM1 343 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 RAB3CQ96E17 227 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 ELMOD3Q96FG2 381 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 SF3B5Q9BWJ5 86 aaKnown RBP9.23□□□□□ -0.93
TPM1-210ENST00000558264 HEXA-AS1Q9H8Q6 139 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 CALHM2Q9HA72 323 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 EMC3Q9P0I2 261 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 ZNF230Q9UIE0 474 aaPredicted RBP9.23□□□□□ -0.93
TPM1-210ENST00000558264 FAM230AA0A1W2PPH8 454 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 CFDP00746 253 aaPredicted RBP9.23□□□□□ -0.93
TPM1-210ENST00000558264 CCL2P13500 99 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 CASRP41180 1078 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 MECP2P51608 486 aaKnown RBP9.23□□□□□ -0.93
TPM1-210ENST00000558264 HIST1H3AP68431 136 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 PSG4Q00888 419 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 PLGLB1Q02325 96 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 GRK1Q15835 563 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 HIST2H3PS2Q5TEC6 136 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 HIST2H3AQ71DI3 136 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 SLC16A14Q7RTX9 510 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 SKA3Q8IX90 412 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 OR8H3Q8N146 312 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 OR51T1Q8NGJ9 327 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 FNDC9Q8TBE3 224 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 RADILQ96JH8 1075 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 FAM173AQ9BQD7 235 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 TRAF4Q9BUZ4 470 aaPredicted RBP9.23□□□□□ -0.93
TPM1-210ENST00000558264 TTTY12Q9BZ98 90 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 ZNF581Q9P0T4 197 aa9.23□□□□□ -0.93
TPM1-210ENST00000558264 FXYD6-FXYD2A0A087WZ82 144 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 A0A0A6YYH2 397 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 A6NJ64 397 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 TERTO14746 1132 aaKnown RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 ARPC5O15511 151 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 SPRY1O43609 319 aaPredicted RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 SYNGR3O43761 229 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 TPOP07202 933 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 CXCL2P19875 107 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 SPINK2P20155 84 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 CCNOP22674 350 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 CTSSP25774 331 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 OTX1P32242 354 aaPredicted RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 PTGFRP43088 359 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 TEX261Q6UWH6 196 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 OR1F12Q8NHA8 337 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 KCNG3Q8TAE7 436 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 MED30Q96HR3 178 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 REEP6Q96HR9 211 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 FXYD6Q9H0Q3 95 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 GPR35Q9HC97 309 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 NOSIPQ9Y314 301 aaKnown RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 U3KQ87 197 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 SPENQ96T58 3664 aaKnown RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 OR14I1A6ND48 311 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 ARGFXA6NJG6 315 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 OR2AT4A6NND4 320 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 SLC22A5O76082 557 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 IGLV3-1P01715 115 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 CD74P04233 296 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 GIPP09681 153 aaPredicted RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 CRYGSP22914 178 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 GABRR1P24046 479 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 SSBP1Q04837 148 aaKnown RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 ARFRP1Q13795 201 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 ZBTB37Q5TC79 503 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 TUSC5Q8IXB3 177 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 SPICQ8N5J4 248 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 TMEM251Q8N6I4 163 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 PNLDC1Q8NA58 520 aaKnown RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 ADAD2Q8NCV1 583 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms