RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ZDHHC13Q8IUH4 622 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 GCSAMQ8N6F7 178 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 TCEANCQ8N8B7 351 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 CSNK2A3Q8NEV1 391 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 OR8B12Q8NGG6 310 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 ZNF418Q8TF45 676 aaPredicted RBP7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 LYZL4Q96KX0 146 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 RGCCQ9H4X1 137 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 NIPAL2Q9H841 368 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 KRT84Q9NSB2 600 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 C1orf123Q9NWV4 160 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 OR5V1Q9UGF6 321 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 LAMP5Q9UJQ1 280 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 COPS3Q9UNS2 423 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 RHBDD3Q9Y3P4 386 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 LRP12Q9Y561 859 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 AUP1Q9Y679 476 aa7.32□□□□□ -1.24
SNRPA1-206ENST00000558059 IGHV2-70DA0A0C4DH43 119 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 KIR2DS1A0A191URI9 304 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 A6NLC8 198 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 PSMD9O00233 223 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 MRPL3P09001 348 aaKnown RBP7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 FCGR1AP12314 374 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 EGR1P18146 543 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 POLR2IP36954 125 aaKnown RBP7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 HILS1P60008 231 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 ROM1Q03395 351 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 MZT1Q08AG7 82 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 GFOD2Q3B7J2 385 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 SFRP4Q6FHJ7 346 aaPredicted RBP7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 MEPCEQ7L2J0 689 aaKnown RBP7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 NLRC3Q7RTR2 1065 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 KRT77Q7Z794 578 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 GALNT4Q8N4A0 578 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 BOLLQ8N9W6 283 aaKnown RBP7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 OR1M1Q8NGA1 313 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 OR8B3Q8NGG8 313 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 OR8S1Q8NH09 359 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 TMEM163Q8TC26 289 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 ZFAND2BQ8WV99 257 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 RAB40AQ8WXH6 277 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 C22orf15Q8WYQ4 148 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 CENPNQ96H22 339 aaPredicted RBP7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 OR8B2Q96RD0 313 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 CIB1Q99828 191 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 SLC6A7Q99884 636 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 FGF23Q9GZV9 251 aaPredicted RBP7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 SEMA6AQ9H2E6 1030 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 C14orf119Q9NWQ9 140 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 FAM206AQ9NX38 181 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 CTSZQ9UBR2 303 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 NBEAL1Q6ZS30 2694 aa7.31□□□□□ -1.24
SNRPA1-206ENST00000558059 TRAV38-1A0A0B4J264 116 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 A0A0U1RQV5 110 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 TMEM269A0A1B0GVZ9 245 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 hCG_1807616A0A1W2PRN6 198 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 OOEPA6NGQ2 149 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 ACOD1A6NK06 481 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 ZNF850A8MQ14 1090 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 C22orf46C9J442 243 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 PHYHO14832 338 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 ZNF254O75437 659 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 FCN3O75636 299 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 CIB2O75838 187 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 CST4P01036 141 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 IGLV3-1P01715 115 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 PPIAL4GP0DN37 164 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 FPR2P25090 351 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 DCTDP32321 178 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 CFHR2P36980 270 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 CSNK2BP67870 215 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 POU4F2Q12837 409 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 PRDX4Q13162 271 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 KCNJ8Q15842 424 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 FAM76BQ5HYJ3 339 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 LCN1P1Q5VSP4 162 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 NXNL2Q5VZ03 156 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 TEX36Q5VZQ5 186 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 KCTD18Q6PI47 426 aaPredicted RBP7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 WDR82Q6UXN9 313 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 KRT74Q7RTS7 529 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 FAM90A1Q86YD7 464 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 ZNF679Q8IYX0 411 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 BCL6BQ8N143 479 aaPredicted RBP7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 BPIFB2Q8N4F0 458 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 ZDHHC22Q8N966 263 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 OR5P3Q8WZ94 311 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 PPP1R14AQ96A00 147 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 UPRTQ96BW1 309 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 OR8B4Q96RC9 309 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 IL4I1Q96RQ9 567 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 CNN2Q99439 309 aaKnown RBP7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 NUDT16L1Q9BRJ7 211 aaKnown RBP7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 MRI1Q9BV20 369 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 PAPOLGQ9BWT3 736 aaKnown RBP7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 SUCNR1Q9BXA5 334 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 PRRG3Q9BZD7 231 aa7.3□□□□□ -1.24
SNRPA1-206ENST00000558059 TLNRD1Q9H1K6 362 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms