RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 MICU1Q9BPX6 476 aa11.27□□□□□ -0.61
SNRPA1-204ENST00000558020 ABHD6Q9BV23 337 aa11.27□□□□□ -0.61
SNRPA1-204ENST00000558020 DPAGT1Q9H3H5 408 aa11.27□□□□□ -0.61
SNRPA1-204ENST00000558020 SMURF1Q9HCE7 757 aa11.27□□□□□ -0.61
SNRPA1-204ENST00000558020 ABCB9Q9NP78 766 aa11.27□□□□□ -0.61
SNRPA1-204ENST00000558020 ARMC1Q9NVT9 282 aa11.27□□□□□ -0.61
SNRPA1-204ENST00000558020 RPUSD1Q9UJJ7 312 aaKnown RBP11.27□□□□□ -0.61
SNRPA1-204ENST00000558020 KPTNQ9Y664 436 aa11.27□□□□□ -0.61
SNRPA1-204ENST00000558020 A0A1B0GVI7 797 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 C5orf63A6NC05 138 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 CLUP10909 449 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 HOXB6P17509 224 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 ATP6V1B2P21281 511 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 GSK3AP49840 483 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 ZNF121P58317 390 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 POU4F2Q12837 409 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 PPP1R8Q12972 351 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 RUSC1-AS1Q66K80 236 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 OLFML2AQ68BL7 652 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 LCN8Q6JVE9 175 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 GALNT4Q8N4A0 578 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 KIR3DL3Q8N743 410 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 ZNF454Q8N9F8 522 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 OR1M1Q8NGA1 313 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 OR6N2Q8NGY6 317 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 GIPC3Q8TF64 312 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 RTL8AQ9BWD3 113 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 PAPOLGQ9BWT3 736 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 TEX12Q9BXU0 123 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 CHIAQ9BZP6 476 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 SIRPDQ9H106 197 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 ZNF391Q9UJN7 358 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 MPC1Q9Y5U8 109 aa11.26□□□□□ -0.61
SNRPA1-204ENST00000558020 IGHV3OR15-7A0A075B7D8 119 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 TCRBV5S2A0A599 114 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 GNGT2O14610 69 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 GLCEO94923 617 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 HMGN1P05114 100 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 RAP2AP10114 183 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 PSKH1P11801 424 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 EEF1B2P24534 225 aaKnown RBP11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 HOXA4Q00056 320 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 GFOD2Q3B7J2 385 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 LRRC10Q5BKY1 277 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 LINC01590Q5TEZ4 76 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 OR10G2Q8NGC3 310 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 THEM6Q8WUY1 208 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 LRTOMTQ8WZ04 291 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 ITFG2Q969R8 447 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 MED30Q96HR3 178 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 HIST1H2AAQ96QV6 131 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 FEVQ99581 238 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 CCL13Q99616 98 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 DNTTIP1Q9H147 329 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 OR51V1Q9H2C8 321 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 ZNF556Q9HAH1 456 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 BRD7Q9NPI1 651 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 C1RLQ9NZP8 487 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 DNAJC27Q9NZQ0 273 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 DNAJB11Q9UBS4 358 aa11.25□□□□□ -0.61
SNRPA1-204ENST00000558020 BTBD17A6NE02 478 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 ARRDC5A6NEK1 342 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 FAM183AA6NL82 134 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 TMEM210A6NLX4 147 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 PRR23D1E9PI22 279 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 M0QZ24 198 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 CDIPTO14735 213 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 TIMM23O14925 209 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 CST1P01037 141 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 LYNP07948 512 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 PRR23D2P0DMB1 279 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 POU1F1P28069 291 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 OPRL1P41146 370 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 GUCA2AQ02747 115 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 OCLNQ16625 522 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 WDR38Q5JTN6 314 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 ATPAF1Q5TC12 328 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 WDR82Q6UXN9 313 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 GDPGP1Q6ZNW5 385 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 C11orf53Q8IXP5 236 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 TIGD4Q8IY51 512 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 PAPD5Q8NDF8 572 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 CCT8L2Q96SF2 557 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 CHID1Q9BWS9 393 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 NIPAL2Q9H841 368 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 MED20Q9H944 212 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 HAO2Q9NYQ3 351 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 ONECUT1Q9UBC0 465 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 RHBDD3Q9Y3P4 386 aa11.24□□□□□ -0.61
SNRPA1-204ENST00000558020 hCG_38984A0A1B0GV85 526 aa11.23□□□□□ -0.61
SNRPA1-204ENST00000558020 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
SNRPA1-204ENST00000558020 CST4P01036 141 aa11.23□□□□□ -0.61
SNRPA1-204ENST00000558020 FBP1P09467 338 aa11.23□□□□□ -0.61
SNRPA1-204ENST00000558020 CALB2P22676 271 aa11.23□□□□□ -0.61
SNRPA1-204ENST00000558020 IER3P46695 156 aa11.23□□□□□ -0.61
SNRPA1-204ENST00000558020 GYS2P54840 703 aa11.23□□□□□ -0.61
SNRPA1-204ENST00000558020 BRICD5Q6PL45 260 aa11.23□□□□□ -0.61
SNRPA1-204ENST00000558020 METAP1DQ6UB28 335 aaPredicted RBP11.23□□□□□ -0.61
SNRPA1-204ENST00000558020 C1orf122Q6ZSJ8 110 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms