RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CCT8L2Q96SF2 557 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 FEVQ99581 238 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 SIRPDQ9H106 197 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 OR51V1Q9H2C8 321 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 RGCCQ9H4X1 137 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 KAAG1Q9UBP8 84 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 CENPVL3A0A0U1RRI6 287 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 A0A1B0GUS0 222 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 FAM181BA6NEQ2 426 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 PRR23D1E9PI22 279 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-235ENST00000557740 GNGT2O14610 69 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 WIPF1O43516 503 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 PRR23D2P0DMB1 279 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-235ENST00000557740 NAA10P41227 235 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-235ENST00000557740 RAG2P55895 527 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 IL5RAQ01344 420 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 FIP1L1Q6UN15 594 aaKnown RBP12.11□□□□□ -0.47
SHMT2-235ENST00000557740 Q6YL49 198 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 RHOUQ7L0Q8 258 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 SLC36A1Q7Z2H8 476 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 TMEM86BQ8N661 226 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 SCCPDHQ8NBX0 429 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 CCDC197Q8NCU1 140 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 OR4F5Q8NH21 305 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 SSMEM1Q8WWF3 244 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 LHX4Q969G2 390 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 AMELYQ99218 206 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 MICU1Q9BPX6 476 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 RTL8AQ9BWD3 113 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 CHID1Q9BWS9 393 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 CHIAQ9BZP6 476 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 SLITRK2Q9H156 845 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 BEX1Q9HBH7 125 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 ACOXLQ9NUZ1 547 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 RHBDD3Q9Y3P4 386 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 MMP24Q9Y5R2 645 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 POMT1Q9Y6A1 747 aa12.11□□□□□ -0.47
SHMT2-235ENST00000557740 MEGF8Q7Z7M0 2845 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 IGHV1-69DA0A0B4J2H0 117 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 SELENOFO60613 162 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 E2F6O75461 281 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 KNG1P01042 644 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 IGHV1-69P01742 117 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 LYNP07948 512 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 MELTFP08582 738 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 ARF6P62330 175 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 KLHL12Q53G59 568 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 WDR38Q5JTN6 314 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 PLBD1Q6P4A8 553 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 WDR82Q6UXN9 313 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 C17orf107Q6ZR85 190 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 PRSS45Q7RTY3 260 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 TIGD4Q8IY51 512 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 ZNF454Q8N9F8 522 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 OTOSQ8NHW6 89 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 THEM6Q8WUY1 208 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 CCL13Q99616 98 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 ZNF556Q9HAH1 456 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 ABCB9Q9NP78 766 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 PDP1Q9P0J1 537 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-235ENST00000557740 ONECUT1Q9UBC0 465 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 DNAJB11Q9UBS4 358 aa12.1□□□□□ -0.47
SHMT2-235ENST00000557740 RPUSD1Q9UJJ7 312 aaKnown RBP12.1□□□□□ -0.47
SHMT2-235ENST00000557740 A0A1B0GW55 424 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 NKX6-3A6NJ46 265 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 CDIPTO14735 213 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 PRODHO43272 600 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 FAM107AO95990 144 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 DUX4L2P0CJ85 424 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 DUX4L3P0CJ86 424 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 DUX4L4P0CJ87 422 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 DUX4L5P0CJ88 424 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 DUX4L6P0CJ89 424 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 DUX4L7P0CJ90 424 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 GMFBP60983 142 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 RPS7P62081 194 aaKnown RBP12.09□□□□□ -0.47
SHMT2-235ENST00000557740 IKZF1Q13422 519 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 GINS1Q14691 196 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 CDONQ4KMG0 1287 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 DUX4L9Q6RFH8 374 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-235ENST00000557740 KCTD8Q6ZWB6 473 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 C11orf53Q8IXP5 236 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 ADGRG5Q8IZF4 528 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 CMTM4Q8IZR5 234 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 GALNT4Q8N4A0 578 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 FAM216BQ8N7L0 139 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 TBC1D15Q8TC07 691 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 C12orf43Q96C57 262 aaKnown RBP12.09□□□□□ -0.47
SHMT2-235ENST00000557740 ITPKCQ96DU7 683 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 CLPTM1LQ96KA5 538 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 TEX12Q9BXU0 123 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 TLNRD1Q9H1K6 362 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 CNTD2Q9H8S5 307 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 ZNF319Q9P2F9 582 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 DUX4Q9UBX2 424 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 MPC1Q9Y5U8 109 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 KPTNQ9Y664 436 aa12.09□□□□□ -0.47
SHMT2-235ENST00000557740 A0A1B0GVI7 797 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 TMEM210A6NLX4 147 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 AQP12BA6NM10 295 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms