RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ZNF426Q9BUY5 554 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 HRH4Q9H3N8 390 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 RIBC2Q9H4K1 309 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 IKZF5Q9H5V7 419 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 TMEM38AQ9H6F2 299 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 MEPEQ9NQ76 525 aaPredicted RBP4.85□□□□□ -1.63
VPS33B-207ENST00000557470 INIPQ9NRY2 104 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 VAPAQ9P0L0 249 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 MIOXQ9UGB7 285 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 ANGPT4Q9Y264 503 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 NOTCH3Q9UM47 2321 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 COL7A1Q02388 2944 aa4.85□□□□□ -1.63
VPS33B-207ENST00000557470 TRBV5-3A0A0A0MS03 114 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 CENPVL3A0A0U1RRI6 287 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TRAPPC13A5PLN9 417 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 C5orf63A6NC05 138 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 IFNL4K9M1U5 179 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 PHYHO14832 338 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TNFRSF13BO14836 293 aaPredicted RBP4.84□□□□□ -1.63
VPS33B-207ENST00000557470 UBDO15205 165 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 ENSAO43768 121 aaKnown RBP4.84□□□□□ -1.63
VPS33B-207ENST00000557470 SNNO75324 88 aaPredicted RBP4.84□□□□□ -1.63
VPS33B-207ENST00000557470 OR7A10O76100 309 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 DIRAS3O95661 229 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 CST2P09228 141 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 CFHR2P36980 270 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TIRAPP58753 221 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 PCBD1P61457 104 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TOP3AQ13472 1001 aaPredicted RBP4.84□□□□□ -1.63
VPS33B-207ENST00000557470 FHL3Q13643 280 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 ENDOGQ14249 297 aaKnown RBP4.84□□□□□ -1.63
VPS33B-207ENST00000557470 GAMTQ14353 236 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 FAM189A2Q15884 450 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF404Q494X3 552 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TTMPQ5BVD1 217 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TNFAIP8L3Q5GJ75 292 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF529Q6P280 563 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 SLC25A47Q6Q0C1 308 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 ARL9Q6T311 187 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 LYPD2Q6UXB3 125 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 Q6ZSV7 163 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 OR5AS1Q8N127 324 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 LINC00469Q8N7U9 141 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 NPEPL1Q8NDH3 523 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 OR8B3Q8NGG8 313 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 OR4D11Q8NGI4 311 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 PFN4Q8NHR9 129 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 VANGL1Q8TAA9 524 aaPredicted RBP4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TBC1D15Q8TC07 691 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 C10orf82Q8WW14 230 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 THRSPQ92748 146 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 HAVCR1Q96D42 359 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 OR8B2Q96RD0 313 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 OR52B2Q96RD2 323 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TBX15Q96SF7 602 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 PRSS27Q9BQR3 290 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TMEM109Q9BVC6 243 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 EVA1AQ9H8M9 152 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 C20orf141Q9NUB4 165 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 THAP1Q9NVV9 213 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 ING3Q9NXR8 418 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 CLN8Q9UBY8 286 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 NDRG4Q9ULP0 352 aaKnown RBP4.84□□□□□ -1.63
VPS33B-207ENST00000557470 STARD10Q9Y365 291 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 TIMM10BQ9Y5J6 103 aa4.84□□□□□ -1.63
VPS33B-207ENST00000557470 GMNCA6NCL1 334 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 NPIPB13A6NJU9 1138 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 ZNF879B4DU55 563 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 NPIPB4C9JG80 1138 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 F5H5P2 479 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 RGS16O15492 202 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 MITFO75030 526 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 ZNF254O75437 659 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 TOX4O94842 621 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 FSTL3O95633 263 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 MT-ND1P03886 318 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 TSPAN19P0C672 248 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 NR2C1P13056 603 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 MMP9P14780 707 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 GPX2P18283 190 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 FUT1P19526 365 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 MSR1P21757 451 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 TUBG1P23258 451 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 PPIBP23284 216 aaKnown RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 SOX6P35712 828 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 MDH1P40925 334 aaKnown RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 PMELP40967 661 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 IER3P46695 156 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 HTR5AP47898 357 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 HOXA4Q00056 320 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 ZIK1Q3SY52 487 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 KRT71Q3SY84 523 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 PAGE3Q5JUK9 113 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 WDR25Q64LD2 544 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 C1orf94Q6P1W5 598 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 GLDNQ6ZMI3 551 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 ZNF841Q6ZN19 808 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 FOXL2NBQ6ZUU3 175 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 PTOV1Q86YD1 416 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms