RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 TMEM138Q9NPI0 162 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 PEX16Q9Y5Y5 336 aa20.45■□□□□ 0.86
SIX4-203ENST00000556952 FLNBO75369 2602 aaKnown RBP20.44■□□□□ 0.86
SIX4-203ENST00000556952 C19orf84I3L1E1 186 aa20.44■□□□□ 0.86
SIX4-203ENST00000556952 BDKRB2P30411 391 aa20.44■□□□□ 0.86
SIX4-203ENST00000556952 RAD52P43351 418 aa20.44■□□□□ 0.86
SIX4-203ENST00000556952 PPP1CBP62140 327 aa20.44■□□□□ 0.86
SIX4-203ENST00000556952 MZT2AQ6P582 158 aa20.44■□□□□ 0.86
SIX4-203ENST00000556952 OR51A2Q8NGJ7 313 aa20.44■□□□□ 0.86
SIX4-203ENST00000556952 BCL2L14Q9BZR8 327 aa20.44■□□□□ 0.86
SIX4-203ENST00000556952 PRSS44E7EML9 344 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 FAM157BP0CG42 384 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 CD37P11049 281 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 COL8A1P27658 744 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 S100A5P33763 92 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 THBS2P35442 1172 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 BMXP51813 675 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 TFF3Q07654 80 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 SPOCK1Q08629 439 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 HIST2H2BCQ6DN03 193 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 FBXW12Q6X9E4 464 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 FTMTQ8N4E7 242 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 DNAAF1Q8NEP3 725 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 CSNK2A3Q8NEV1 391 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 FOXRED1Q96CU9 486 aaPredicted RBP20.43■□□□□ 0.86
SIX4-203ENST00000556952 MRI1Q9BV20 369 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 OR51B6Q9H340 312 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 POFUT1Q9H488 388 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 KCNJ16Q9NPI9 418 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 ABRACLQ9P1F3 81 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 CRYBG3Q68DQ2 2970 aa20.43■□□□□ 0.86
SIX4-203ENST00000556952 ZNF816-ZNF321PA0A0X1KG74 233 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 CRYAAP02489 173 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 ATF1P18846 271 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 CALCRP30988 508 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 SORDQ00796 357 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 TMEM42Q69YG0 159 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 CDH26Q8IXH8 852 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 OR1J1Q8NGS3 322 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 TECTBQ96PL2 329 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 KLF2Q9Y5W3 355 aaPredicted RBP20.42■□□□□ 0.86
SIX4-203ENST00000556952 GGT3PA6NGU5 568 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 ALDOBP05062 364 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 HLXQ14774 488 aaPredicted RBP20.42■□□□□ 0.86
SIX4-203ENST00000556952 CLVS2Q5SYC1 327 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 DDI2Q5TDH0 399 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 ALKBH2Q6NS38 261 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 TMEM108Q6UXF1 575 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 C22orf34Q6ZV56 151 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 KRT74Q7RTS7 529 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 OR56B2PQ8NGI1 322 aa20.42■□□□□ 0.86
SIX4-203ENST00000556952 SLC17A2O00624 439 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 MAGEB3O15480 346 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 THBDP07204 575 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 SLC2A2P11168 524 aaPredicted RBP20.41■□□□□ 0.86
SIX4-203ENST00000556952 OR5AS1Q8N127 324 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 METTL17Q9H7H0 456 aaPredicted RBP20.41■□□□□ 0.86
SIX4-203ENST00000556952 PLGRKTQ9HBL7 147 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 NEK6Q9HC98 313 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 NGBQ9NPG2 151 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 NPDC1Q9NQX5 325 aaPredicted RBP20.41■□□□□ 0.86
SIX4-203ENST00000556952 KCNN3Q9UGI6 736 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 CMAHPQ9Y471 501 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 SPEF1Q9Y4P9 236 aa20.41■□□□□ 0.86
SIX4-203ENST00000556952 RGS5O15539 181 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 OCMP0CE72 109 aaPredicted RBP20.4■□□□□ 0.86
SIX4-203ENST00000556952 RAC2P15153 192 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 PTAFRP25105 342 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 PRSS12P56730 875 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 SCAND1P57086 179 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 CNN3Q15417 329 aaKnown RBP20.4■□□□□ 0.86
SIX4-203ENST00000556952 MOGQ16653 247 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 HES5Q5TA89 166 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 SLC25A40Q8TBP6 338 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 PIGTQ969N2 578 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 SPSB1Q96BD6 273 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 UQCC2Q9BRT2 126 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 OR2J1Q9GZK6 312 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 STEAP1Q9UHE8 339 aa20.4■□□□□ 0.86
SIX4-203ENST00000556952 CENPEQ02224 2701 aa20.39■□□□□ 0.86
SIX4-203ENST00000556952 CD300LBA8K4G0 201 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 CTDSP2O14595 271 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 CD40P25942 277 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 RANBP1P43487 201 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 UBE2V2Q15819 145 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 SPATA46Q5T0L3 261 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 LYPD6Q86Y78 171 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 WFDC8Q8IUA0 241 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 OR52N4Q8NGI2 321 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 OR6M1Q8NGM8 313 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 UBASH3BQ8TF42 649 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 S100ZQ8WXG8 99 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 WDFY2Q96P53 400 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 SORCS2Q96PQ0 1159 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 COMMD3Q9UBI1 195 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 NDRG3Q9UGV2 375 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 SETXQ7Z333 2677 aaKnown RBP20.39■□□□□ 0.85
SIX4-203ENST00000556952 PRR14LQ5THK1 2151 aa20.39■□□□□ 0.85
SIX4-203ENST00000556952 HEATR1Q9H583 2144 aaKnown RBP20.39■□□□□ 0.85
SIX4-203ENST00000556952 IGKV1-9A0A0C4DH69 117 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms