RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 SNAI3Q3KNW1 292 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 SPRNQ5BIV9 151 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 CD276Q5ZPR3 534 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 PLBD1Q6P4A8 553 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 LRRN1Q6UXK5 716 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 OR4Q3Q8NH05 313 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 OR2AE1Q8NHA4 323 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 Q8TCH9 128 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 THEM6Q8WUY1 208 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 GCDHQ92947 438 aaPredicted RBP6.15□□□□□ -1.43
SCFD1-222ENST00000556768 NRBF2Q96F24 287 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 NEIL1Q96FI4 390 aaPredicted RBP6.15□□□□□ -1.43
SCFD1-222ENST00000556768 RAX2Q96IS3 184 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 SIGLEC11Q96RL6 698 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 OR10A2Q9H208 303 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 MMADHCQ9H3L0 296 aaPredicted RBP6.15□□□□□ -1.43
SCFD1-222ENST00000556768 RGCCQ9H4X1 137 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 UFSP2Q9NUQ7 469 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 DCAF16Q9NXF7 216 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 POMPQ9Y244 141 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 TRAV38-1A0A0B4J264 116 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 A0A1B0GWJ7 208 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 hCG_1807616A0A1W2PRN6 198 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 ANXA2P2A6NMY6 339 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 TIPRLO75663 272 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 GRPP07492 148 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 CD200P41217 278 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 PITPNBP48739 271 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 NPY4RP50391 375 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 HILS1P60008 231 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 MAB21L1Q13394 359 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 OR8B8Q15620 311 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 SNAPC1Q16533 368 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 KCTD18Q6PI47 426 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-222ENST00000556768 C12orf54Q6X4T0 127 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 DCDC5Q6ZRR9 648 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 THAP5Q7Z6K1 395 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 IQCF1Q8N6M8 205 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 DEFB108BQ8NET1 73 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 CSNK2A3Q8NEV1 391 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 RNF133Q8WVZ7 376 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 ZNRF4Q8WWF5 429 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 RAB40AQ8WXH6 277 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 PGAM5Q96HS1 289 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 HIST1H2AAQ96QV6 131 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 TMEM246Q9BRR3 403 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 ABHD6Q9BV23 337 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 WDR12Q9GZL7 423 aaKnown RBP6.14□□□□□ -1.43
SCFD1-222ENST00000556768 NIPAL2Q9H841 368 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 MED20Q9H944 212 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 MMP26Q9NRE1 261 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 PAPOLBQ9NRJ5 636 aaKnown RBP6.14□□□□□ -1.43
SCFD1-222ENST00000556768 VNN3Q9NY84 501 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 DNAJC27Q9NZQ0 273 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 ERVK-18Q9QC07 812 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 ENOPH1Q9UHY7 261 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 ZNF391Q9UJN7 358 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 LAMP5Q9UJQ1 280 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 NUP50Q9UKX7 468 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 ANK2Q01484 3957 aa6.14□□□□□ -1.43
SCFD1-222ENST00000556768 A8MXK9 166 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 PHYHO14832 338 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 FKBP6O75344 327 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 LPLP06858 475 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 LIPFP07098 398 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 PRKACGP22612 351 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 NAA10P41227 235 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 ACTR3P61158 418 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 MICBQ29980 383 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 ZNF404Q494X3 552 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 SLC35D3Q5M8T2 416 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 GLYATL3Q5SZD4 288 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 FAM57BQ71RH2 274 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 SLC16A9Q7RTY1 509 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 KRT77Q7Z794 578 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 ZDHHC13Q8IUH4 622 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 CPOQ8IVL8 374 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 OR2C3Q8N628 320 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 BOLLQ8N9W6 283 aaKnown RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 OR56B2PQ8NGI1 322 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 OR10S1Q8NGN2 331 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 OTOSQ8NHW6 89 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 FAM216AQ8WUB2 273 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 C22orf15Q8WYQ4 148 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 ZMYND19Q96E35 227 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 REEP6Q96HR9 211 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 MROQ9BYG7 248 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 MS4A7Q9GZW8 240 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 ABCB9Q9NP78 766 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 TVP23BQ9NYZ1 205 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 INSIG2Q9Y5U4 225 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 TMEM14AQ9Y6G1 99 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 U3KQE9 123 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 TCRBV3S1A0A5B6 114 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 G3V2T6 193 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 TRAPPC2LH3BP13 241 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 H3BS24 57 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 GSC2O15499 205 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 FAM20BO75063 409 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 VENTXO95231 258 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms