RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ZNF322Q6U7Q0 402 aaPredicted RBP9.68□□□□□ -0.86
SLIRP-205ENST00000556310 TREML4Q6UXN2 200 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 OR4M2Q8NGB6 313 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 OR51G2Q8NGK0 314 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 OR8S1Q8NH09 359 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 RFKQ969G6 155 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 ITFG2Q969R8 447 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 HRASLS5Q96KN8 279 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 DMRTB1Q96MA1 342 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 PAPOLGQ9BWT3 736 aaKnown RBP9.68□□□□□ -0.86
SLIRP-205ENST00000556310 TTTY10Q9BZA0 68 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 MOB1AQ9H8S9 216 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 UFSP2Q9NUQ7 469 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 C14orf119Q9NWQ9 140 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 IMPAD1Q9NX62 359 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 IKZF2Q9UKS7 526 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 ARHGAP32A7KAX9 2087 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 DOCK11Q5JSL3 2073 aa9.68□□□□□ -0.86
SLIRP-205ENST00000556310 PPIAL4EA0A075B759 164 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 PPIAL4CA0A0B4J2A2 164 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 TMEM269A0A1B0GVZ9 245 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 A8MXK9 166 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 PPIAL4DF5H284 164 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 J3QLI3 93 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 PPIAL4FP0DN26 164 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 GATA3P23771 443 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 ACKR3P25106 362 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 THBS2P35442 1172 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 GNALP38405 381 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 EGR3Q06889 387 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 ZNF404Q494X3 552 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 TRUB1Q8WWH5 349 aaKnown RBP9.67□□□□□ -0.86
SLIRP-205ENST00000556310 STMN2Q93045 179 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 EME1Q96AY2 570 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 LYZL4Q96KX0 146 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 TMEM165Q9HC07 324 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 ABCB9Q9NP78 766 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 RNF7Q9UBF6 113 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 NUFIP1Q9UHK0 495 aaKnown RBP9.67□□□□□ -0.86
SLIRP-205ENST00000556310 LRCH1Q9Y2L9 728 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 PPIAL4AQ9Y536 164 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 MPC1Q9Y5U8 109 aa9.67□□□□□ -0.86
SLIRP-205ENST00000556310 FBN1P35555 2871 aaKnown RBP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 A6NLC8 198 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 ANXA2P2A6NMY6 339 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 SRSF10O75494 262 aaKnown RBP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 ZNF205O95201 554 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 CST4P01036 141 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 IGLV3-1P01715 115 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 OR2T7P0C7T2 308 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 ATP6V1B1P15313 513 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 RPS2P15880 293 aaKnown RBP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 SRP14P37108 136 aaKnown RBP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 SNRPGP62308 76 aaKnown RBP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 LCN2P80188 198 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 IL5RAQ01344 420 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 MFGE8Q08431 387 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 ZSCAN26Q16670 478 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 ZIK1Q3SY52 487 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 ESCO2Q56NI9 601 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 SLC25A30Q5SVS4 291 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 FAM201AQ5SY85 155 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 DCAF12L2Q5VW00 463 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 WDR86Q86TI4 376 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 TEX29Q8N6K0 151 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 OR2T27Q8NH04 317 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 MBOAT4Q96T53 435 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 TMEM246Q9BRR3 403 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 PBOV1Q9GZY1 135 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 C1orf123Q9NWV4 160 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 MRM2Q9UI43 246 aaKnown RBP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 POLR3KQ9Y2Y1 108 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-205ENST00000556310 RHBDD3Q9Y3P4 386 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 R4GMQ9 66 aa9.66□□□□□ -0.86
SLIRP-205ENST00000556310 ZNF816-ZNF321PA0A0X1KG74 233 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 hCG_1807616A0A1W2PRN6 198 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 LOC110117498-PIK3R3F6TDL0 507 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 APOL3O95236 402 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 KRT8P05787 483 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 GRPP07492 148 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 WNT2P09544 360 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 ZFP36P26651 326 aaKnown RBP9.65□□□□□ -0.86
SLIRP-205ENST00000556310 SEC61A1P61619 476 aaKnown RBP9.65□□□□□ -0.86
SLIRP-205ENST00000556310 ZNF154Q13106 437 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 PRDX4Q13162 271 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 KCNJ8Q15842 424 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 BCL2L15Q5TBC7 163 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 MEDAGQ5VYS4 303 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 FAHD2BQ6P2I3 314 aaPredicted RBP9.65□□□□□ -0.86
SLIRP-205ENST00000556310 DCDC5Q6ZRR9 648 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 ZBTB49Q6ZSB9 765 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 NLRC3Q7RTR2 1065 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 KRT74Q7RTS7 529 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 SSX6Q7RTT6 188 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 COMMD2Q86X83 199 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 GALNT4Q8N4A0 578 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 OR10H4Q8NGA5 316 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 NEIL1Q96FI4 390 aaPredicted RBP9.65□□□□□ -0.86
SLIRP-205ENST00000556310 FAHD2AQ96GK7 314 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms