RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	MOG	Q16653	247 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	CCDC92	Q53HC0	331 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	ELFN2	Q5R3F8	820 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	ASRGL1	Q7L266	308 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	DCXR	Q7Z4W1	244 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	NAA40	Q86UY6	237 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	LURAP1L	Q8IV03	231 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	ZNF584	Q8IVC4	421 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	OR5AS1	Q8N127	324 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	LRRC75A-AS1	Q8N1F1	130 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	ZNF525	Q8N782	197 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	ZNF283	Q8N7M2	679 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	TCEANC	Q8N8B7	351 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	PAPD5	Q8NDF8	572 aa	Known RBP	3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	OR5L1	Q8NGL2	311 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	OR6N2	Q8NGY6	317 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	ZNRF4	Q8WWF5	429 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	SPTSSA	Q969W0	71 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	MRPL24	Q96A35	216 aa	Known RBP	3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	ZMYND19	Q96E35	227 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	NRBF2	Q96F24	287 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	CENPN	Q96H22	339 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	POM121L2	Q96KW2	1035 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	IL4I1	Q96RQ9	567 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	GPX7	Q96SL4	187 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	DOK1	Q99704	481 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	CIB1	Q99828	191 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	SMR3A	Q99954	134 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	PKP2	Q99959	881 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	MRPL37	Q9BZE1	423 aa	Known RBP	3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	BCL2L14	Q9BZR8	327 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	OR2J1	Q9GZK6	312 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	NARFL	Q9H6Q4	476 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	WDR76	Q9H967	626 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	NTN4	Q9HB63	628 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	DNAJC27	Q9NZQ0	273 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	GTF2A1L	Q9UNN4	478 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	STARD10	Q9Y365	291 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	UBE2J1	Q9Y385	318 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	FKBP7	Q9Y680	259 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	ABCA1	O95477	2261 aa		3.97	□□□□□ -1.77
ATXN3-238	ENST00000556288	ACAN	P16112	2415 aa		3.96	□□□□□ -1.77
ATXN3-238	ENST00000556288	NBPF19	A0A087WUL8	3843 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	IGLV1-36	A0A0B4J1U3	117 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	IGHV3-64D	A0A0J9YX35	117 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	TMEM129	A0AVI4	362 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR6C6	A6NF89	314 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	GGT3P	A6NGU5	568 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288		M0R129	80 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	PPIH	O43447	177 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	SELENOF	O60613	162 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	GLCE	O94923	617 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	TNFRSF6B	O95407	300 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	H2BFM	P0C1H6	154 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	SPI1	P17947	270 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	IGFBP5	P24593	272 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	COL8A2	P25067	703 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	GGT2	P36268	569 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	MPV17	P39210	176 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	WNT5A	P41221	380 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	NAA10	P41227	235 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ENTPD1	P49961	510 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF81	P51508	661 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF133	P52736	654 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ACTR3	P61158	418 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	CDK5	Q00535	292 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	LRRC36	Q1X8D7	754 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF626	Q68DY1	528 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZFP1	Q6P2D0	407 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	CFAP77	Q6ZQR2	320 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZBTB49	Q6ZSB9	765 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	DPY19L4	Q7Z388	723 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	KRT77	Q7Z794	578 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF101	Q8IZC7	436 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	CIART	Q8N365	385 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	BHLHE23	Q8NDY6	225 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	NUP37	Q8NFH4	326 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	BBS1	Q8NFJ9	593 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC26A10	Q8NG04	563 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR2Z1	Q8NG97	314 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	KLF14	Q8TD94	323 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	SPRYD4	Q8WW59	207 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	GLMP	Q8WWB7	406 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	NPIPB3	Q92617	1050 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	GTF3A	Q92664	365 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	PTP4A1	Q93096	173 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	EME1	Q96AY2	570 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLAMF6	Q96DU3	332 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	C18orf12	Q96KH6	178 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF75A	Q96N20	296 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	INTS14	Q96SY0	518 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	MYCBP	Q99417	103 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ATF6B	Q99941	703 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	COPS4	Q9BT78	406 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	WAC	Q9BTA9	647 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	ELOVL1	Q9BW60	279 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	HCAR1	Q9BXC0	346 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	REG4	Q9BYZ8	158 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	TTTY10	Q9BZA0	68 aa		3.96	□□□□□ -1.78
ATXN3-238	ENST00000556288	PRRG3	Q9BZD7	231 aa		3.96	□□□□□ -1.78

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